Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm8244-201ENSMUST00000121254 264 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm11797-201ENSMUST00000121336 754 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm16327-201ENSMUST00000137146 228 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm6625-201ENSMUST00000177870 272 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm27636-201ENSMUST00000184528 122 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm29525-201ENSMUST00000189844 699 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm29475-201ENSMUST00000190767 312 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm29523-201ENSMUST00000191415 699 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm38201-201ENSMUST00000192143 387 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm43090-201ENSMUST00000202459 314 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm45162-201ENSMUST00000209013 618 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm45727-201ENSMUST00000212886 572 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm17829-201ENSMUST00000219782 344 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 AC164629.1-201ENSMUST00000220250 1113 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm25147-201ENSMUST00000083030 105 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm25481-201ENSMUST00000083221 158 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.87□□□□□ -1.79
H2afb2S4R1M3 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Mir193b-201ENSMUST00000103784 79 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm23424-201ENSMUST00000103889 110 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm24281-201ENSMUST00000104234 136 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm14725-201ENSMUST00000120324 828 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm12313-201ENSMUST00000121347 421 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm11403-201ENSMUST00000122195 369 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm23231-201ENSMUST00000157299 104 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm22219-201ENSMUST00000157562 319 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm22084-201ENSMUST00000157585 105 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm22519-201ENSMUST00000158270 178 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm4207-201ENSMUST00000173144 960 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm26556-201ENSMUST00000180645 320 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm38214-201ENSMUST00000192581 988 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm36997-201ENSMUST00000195090 707 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm37993-201ENSMUST00000195301 988 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm44681-201ENSMUST00000208447 842 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm5548-201ENSMUST00000055878 397 ntBASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
H2afb2S4R1M3 Gm10997-201ENSMUST00000210294 1500 ntBASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Gm25647-201ENSMUST00000101832 78 ntBASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Gm25823-201ENSMUST00000101995 78 ntBASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Gm15364-201ENSMUST00000119618 585 ntBASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Gm12884-201ENSMUST00000120371 325 ntBASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.85□□□□□ -1.79
H2afb2S4R1M3 Gm15926-201ENSMUST00000120492 550 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms