Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Gm24914-201ENSMUST00000157285 313 ntBASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Gm6510-201ENSMUST00000195916 574 ntBASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Gm42539-201ENSMUST00000197009 308 ntBASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Gm44869-201ENSMUST00000208836 357 ntBASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.64□□□□□ -1.83
Scn8aQ9WTU3 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm12379-201ENSMUST00000119607 391 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm4725-201ENSMUST00000151048 587 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Mir6938-201ENSMUST00000184173 63 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm37311-201ENSMUST00000195541 2024 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm23175-201ENSMUST00000104371 132 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm5762-201ENSMUST00000119204 258 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm11830-201ENSMUST00000120175 561 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm13121-201ENSMUST00000120637 632 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm12578-201ENSMUST00000121244 417 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm23391-201ENSMUST00000157579 104 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm27592-201ENSMUST00000157729 126 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm23082-201ENSMUST00000157852 133 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm17159-201ENSMUST00000169043 482 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm22174-201ENSMUST00000175050 125 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm22692-201ENSMUST00000175055 125 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm27634-201ENSMUST00000175060 126 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm26460-201ENSMUST00000175061 126 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm22460-201ENSMUST00000175269 124 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm25535-201ENSMUST00000175364 125 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm24365-201ENSMUST00000175384 125 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm44310-201ENSMUST00000175424 126 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm22639-201ENSMUST00000175591 125 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm24979-201ENSMUST00000178626 126 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm27743-201ENSMUST00000185136 126 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm36964-201ENSMUST00000191876 198 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Scn8aQ9WTU3 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Mir680-3-201ENSMUST00000102298 87 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm24376-201ENSMUST00000104399 127 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm15988-201ENSMUST00000118677 367 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm13873-201ENSMUST00000119208 427 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm13118-201ENSMUST00000120402 549 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm28094-201ENSMUST00000185262 390 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 BC055308-201ENSMUST00000193380 2538 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm7041-201ENSMUST00000201227 524 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms