Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm13058-201ENSMUST00000117097 1435 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm23063-201ENSMUST00000102350 93 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm24935-201ENSMUST00000103770 110 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm15076-201ENSMUST00000117076 474 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm13737-201ENSMUST00000119793 232 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm15885-201ENSMUST00000122114 388 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm4912-201ENSMUST00000122212 1044 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm23905-201ENSMUST00000157568 109 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm27899-201ENSMUST00000184715 64 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Mir6899-201ENSMUST00000184798 64 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm29428-201ENSMUST00000190086 409 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm18900-201ENSMUST00000193218 584 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm37111-201ENSMUST00000193250 634 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm43649-201ENSMUST00000196596 391 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm43345-201ENSMUST00000199484 269 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm44032-201ENSMUST00000204841 166 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Gm44946-201ENSMUST00000208425 572 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Mir27a-201ENSMUST00000083510 87 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim3Q9R1R2 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm24788-201ENSMUST00000104283 156 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm26019-201ENSMUST00000104407 119 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Snora64-201ENSMUST00000104521 134 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm14771-201ENSMUST00000118249 203 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm14172-201ENSMUST00000118255 644 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Anp32-ps-201ENSMUST00000118265 388 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm25965-201ENSMUST00000157170 93 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm25908-201ENSMUST00000157624 98 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm20526-201ENSMUST00000173416 158 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm28920-201ENSMUST00000189957 699 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm38270-201ENSMUST00000192721 407 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm35702-201ENSMUST00000198653 511 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm9245-201ENSMUST00000200528 983 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm19726-201ENSMUST00000205008 240 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm45034-201ENSMUST00000206831 482 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm5338-201ENSMUST00000209530 639 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms