Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm28969-211ENSMUST00000190992 615 ntBASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm28990-207ENSMUST00000191219 615 ntBASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm36468-201ENSMUST00000192119 615 ntBASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm31572-201ENSMUST00000193341 615 ntBASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm30175-201ENSMUST00000194173 615 ntBASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm30858-201ENSMUST00000195516 615 ntBASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm44419-201ENSMUST00000203338 229 ntBASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm44543-201ENSMUST00000209136 396 ntBASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm10988-201ENSMUST00000209150 1088 ntBASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm23412-201ENSMUST00000083017 107 ntBASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Gm15084-201ENSMUST00000178585 1502 ntBASIC6.76□□□□□ -1.33
Ube3bQ9ES34 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 AC164102.1-201ENSMUST00000220524 1553 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 AC164297.1-201ENSMUST00000224484 1561 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Fus-202ENSMUST00000079045 2623 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm23839-201ENSMUST00000116957 109 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm13692-201ENSMUST00000120774 371 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm13533-201ENSMUST00000121104 177 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm23872-201ENSMUST00000175432 77 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm22569-201ENSMUST00000175545 124 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm28847-201ENSMUST00000186778 700 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm9722-201ENSMUST00000194568 802 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm3010-201ENSMUST00000198805 448 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm45032-201ENSMUST00000205375 520 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm18213-201ENSMUST00000207850 178 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm45731-201ENSMUST00000211988 1203 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 AC165157.3-201ENSMUST00000220815 103 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm23330-201ENSMUST00000082660 164 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Gm42598-201ENSMUST00000200110 2437 ntBASIC6.75□□□□□ -1.33
Ube3bQ9ES34 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ube3bQ9ES34 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Mir875-201ENSMUST00000104698 78 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm10241-201ENSMUST00000117664 286 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm14521-201ENSMUST00000119545 350 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm15377-201ENSMUST00000119594 246 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm14559-201ENSMUST00000121745 496 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm25291-201ENSMUST00000122795 144 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Gm23779-201ENSMUST00000157938 64 ntBASIC6.74□□□□□ -1.33
Ube3bQ9ES34 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms