Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm24380-201ENSMUST00000122696 324 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Gm23098-201ENSMUST00000157552 299 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Gm25520-201ENSMUST00000158389 118 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Gm23112-201ENSMUST00000158606 125 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Mir1251-201ENSMUST00000175486 84 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Gm8296-201ENSMUST00000185597 524 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Gm17887-201ENSMUST00000200194 547 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Gm18193-201ENSMUST00000210017 772 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Gm45317-201ENSMUST00000210385 223 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Gm36247-201ENSMUST00000211834 285 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Gm26449-201ENSMUST00000082452 104 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Cdc40Q9DC48 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.72□□□□□ -1.81
Cdc40Q9DC48 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Cdc40Q9DC48 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.71□□□□□ -1.81
Cdc40Q9DC48 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
Cdc40Q9DC48 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.71□□□□□ -1.81
Cdc40Q9DC48 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
Cdc40Q9DC48 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm15313-201ENSMUST00000119179 282 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm6584-201ENSMUST00000119671 447 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm14927-201ENSMUST00000120283 454 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm11404-201ENSMUST00000120872 494 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm15038-201ENSMUST00000122144 296 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm22986-201ENSMUST00000122753 130 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm11281-201ENSMUST00000141391 576 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm12226-201ENSMUST00000144172 876 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm16290-201ENSMUST00000161175 474 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm8224-201ENSMUST00000166178 497 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm37501-201ENSMUST00000192830 691 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm43124-201ENSMUST00000201878 278 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Cdc40Q9DC48 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Mir34b-201ENSMUST00000083558 84 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
Cdc40Q9DC48 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Cdc40Q9DC48 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm13664-201ENSMUST00000117304 345 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm13567-201ENSMUST00000118026 247 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm14771-201ENSMUST00000118249 203 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm24505-201ENSMUST00000157682 126 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm17155-201ENSMUST00000165969 473 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm20673-201ENSMUST00000177167 430 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm25942-201ENSMUST00000180080 110 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm28997-201ENSMUST00000188759 429 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm18547-201ENSMUST00000192439 811 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm4644-201ENSMUST00000197587 400 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms