Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm25088-201ENSMUST00000101803 79 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm11313-201ENSMUST00000118779 432 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm11369-201ENSMUST00000120812 318 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm15335-201ENSMUST00000122442 411 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm7846-201ENSMUST00000145844 274 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm25425-201ENSMUST00000157611 96 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm22381-201ENSMUST00000158186 107 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm6264-201ENSMUST00000160802 624 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Mir5617-201ENSMUST00000176786 57 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm23144-201ENSMUST00000180226 107 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Ighv1-29-201ENSMUST00000194116 342 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm44856-201ENSMUST00000206639 304 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm45590-201ENSMUST00000209715 262 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm45722-201ENSMUST00000213075 466 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm10095-201ENSMUST00000222765 483 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 AC124489.3-201ENSMUST00000224037 278 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 AC166369.1-201ENSMUST00000228126 351 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Glycam1-204ENSMUST00000228895 641 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm10088-201ENSMUST00000074116 423 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Olfr713-201ENSMUST00000098139 975 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim42Q9D2H5 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.75□□□□□ -1.49
Trim42Q9D2H5 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm12245-201ENSMUST00000117266 357 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm11561-201ENSMUST00000117429 417 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm5073-201ENSMUST00000118222 820 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm7429-201ENSMUST00000118664 348 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm11447-201ENSMUST00000118983 858 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm12053-201ENSMUST00000119022 252 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm14428-201ENSMUST00000120408 822 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm23206-201ENSMUST00000122720 184 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm24499-201ENSMUST00000158446 104 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm24767-201ENSMUST00000158509 95 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm17528-201ENSMUST00000171026 239 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm28098-201ENSMUST00000191361 699 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm18194-201ENSMUST00000210455 481 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm46389-201ENSMUST00000223199 392 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 AC154576.2-202ENSMUST00000223916 688 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm25929-201ENSMUST00000082784 107 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Mir7b-201ENSMUST00000083557 111 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm23733-201ENSMUST00000083750 106 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim42Q9D2H5 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Trim42Q9D2H5 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim42Q9D2H5 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim42Q9D2H5 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim42Q9D2H5 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim42Q9D2H5 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.73□□□□□ -1.49
Trim42Q9D2H5 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim42Q9D2H5 Gm26300-201ENSMUST00000102282 94 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms