Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Gm6113-201ENSMUST00000180319 639 ntBASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Gm27414-201ENSMUST00000185033 381 ntBASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.52□□□□□ -1.69
Vps28Q9D1C8 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Gm8681-201ENSMUST00000219115 618 ntBASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Gm9616-201ENSMUST00000221154 781 ntBASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 AC118006.2-201ENSMUST00000224167 962 ntBASIC4.52□□□□□ -1.69
Vps28Q9D1C8 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.52□□□□□ -1.69
Vps28Q9D1C8 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.52□□□□□ -1.69
Vps28Q9D1C8 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.52□□□□□ -1.69
Vps28Q9D1C8 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Vps28Q9D1C8 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm11878-201ENSMUST00000117908 400 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm12719-201ENSMUST00000118859 241 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm13194-201ENSMUST00000142299 311 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm16331-201ENSMUST00000144274 498 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm22186-201ENSMUST00000157822 122 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm23781-201ENSMUST00000157940 308 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Rab26os-201ENSMUST00000176215 477 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm25412-201ENSMUST00000180258 107 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm27538-201ENSMUST00000185065 294 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm29228-201ENSMUST00000185489 418 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm28688-201ENSMUST00000187301 268 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm38213-201ENSMUST00000193203 173 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm37088-201ENSMUST00000193887 406 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm3010-201ENSMUST00000198805 448 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm4859-201ENSMUST00000199625 787 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm17779-201ENSMUST00000213395 394 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 AC137871.2-201ENSMUST00000226482 289 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm19074-201ENSMUST00000218915 1429 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 AC154681.1-201ENSMUST00000225876 1735 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.51□□□□□ -1.69
Vps28Q9D1C8 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm25726-201ENSMUST00000104529 129 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms