Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Mir879-201ENSMUST00000104703 76 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm26173-201ENSMUST00000158416 136 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm5139-201ENSMUST00000175943 249 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm5527-201ENSMUST00000179821 642 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm37828-201ENSMUST00000192496 432 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm37845-201ENSMUST00000194977 355 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm7407-201ENSMUST00000208301 568 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 AC153957.1-201ENSMUST00000215235 229 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm18016-201ENSMUST00000216119 801 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm20368-201ENSMUST00000220716 301 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 AC166358.6-201ENSMUST00000221834 1206 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm7822-201ENSMUST00000222433 581 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm18026-201ENSMUST00000222789 727 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm23733-201ENSMUST00000083750 106 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx56Q9D0R4 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm13451-201ENSMUST00000117649 592 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm11913-201ENSMUST00000119094 336 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm12935-201ENSMUST00000119352 246 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm11891-201ENSMUST00000121241 619 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm23781-201ENSMUST00000157940 308 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm24931-201ENSMUST00000158324 107 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm25873-201ENSMUST00000180317 107 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Mir6344-201ENSMUST00000183462 104 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Mir6911-201ENSMUST00000184241 69 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm42805-201ENSMUST00000196158 276 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm43407-201ENSMUST00000199816 317 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm7825-201ENSMUST00000204046 416 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 AC153516.1-201ENSMUST00000217955 779 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm7040-201ENSMUST00000223271 443 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm22265-201ENSMUST00000082947 116 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm25818-201ENSMUST00000083282 164 ntBASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ddx56Q9D0R4 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm14575-201ENSMUST00000117210 560 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm11372-201ENSMUST00000117348 570 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm15025-201ENSMUST00000118434 418 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm2005-201ENSMUST00000120759 542 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm23885-201ENSMUST00000122682 294 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm24060-201ENSMUST00000157494 95 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms