Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Gm14103-201ENSMUST00000119075 366 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Gm12001-201ENSMUST00000121727 913 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Gm25177-201ENSMUST00000122634 117 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Gm6650-201ENSMUST00000166710 614 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Gm29428-201ENSMUST00000190086 409 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Gm28500-201ENSMUST00000190286 151 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Gm38201-201ENSMUST00000192143 387 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Gm43037-201ENSMUST00000196808 250 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Gm5885-202ENSMUST00000203357 528 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Gm8774-201ENSMUST00000203621 692 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 AC161250.1-201ENSMUST00000213426 1111 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 AC153532.1-201ENSMUST00000218126 1111 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Gm5185-201ENSMUST00000080271 619 ntBASIC4.59□□□□□ -1.67
Smc1aQ9CU62 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Smc1aQ9CU62 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm25420-201ENSMUST00000104216 127 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm5757-201ENSMUST00000117494 528 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm14365-201ENSMUST00000117535 587 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm43494-201ENSMUST00000197672 388 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm43730-201ENSMUST00000199863 372 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm45078-201ENSMUST00000205343 546 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm18441-201ENSMUST00000223539 617 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 AC132833.3-201ENSMUST00000227472 866 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 CT025525.3-201ENSMUST00000228858 366 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Snord21-201ENSMUST00000082519 94 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Smc1aQ9CU62 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm25169-201ENSMUST00000104190 129 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm15951-201ENSMUST00000118377 400 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm14875-201ENSMUST00000120881 319 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm15038-201ENSMUST00000122144 296 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm12755-201ENSMUST00000122297 282 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm22345-201ENSMUST00000122644 107 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm22986-201ENSMUST00000122753 130 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm25898-201ENSMUST00000158303 106 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm17177-201ENSMUST00000169144 483 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm27695-201ENSMUST00000184301 91 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm27952-201ENSMUST00000184748 105 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm29588-201ENSMUST00000185738 298 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm43856-201ENSMUST00000197004 369 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms