Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm43892-201ENSMUST00000204373 265 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm18410-201ENSMUST00000207199 577 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm18268-201ENSMUST00000208445 943 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 AC116395.1-201ENSMUST00000225480 1143 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 AC121960.3-201ENSMUST00000227077 623 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm6776-201ENSMUST00000057752 900 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm23447-201ENSMUST00000082798 163 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm10552-201ENSMUST00000113396 372 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm23879-201ENSMUST00000116874 126 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm12885-201ENSMUST00000122246 328 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm9785-202ENSMUST00000144563 593 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm18522-201ENSMUST00000173947 650 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm22243-201ENSMUST00000178754 120 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm28625-201ENSMUST00000188309 205 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm37543-201ENSMUST00000192443 1031 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm37288-201ENSMUST00000193963 334 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm43524-201ENSMUST00000197278 298 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm17956-201ENSMUST00000199931 838 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm17893-201ENSMUST00000203017 770 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm31931-201ENSMUST00000219666 222 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 AC113031.2-201ENSMUST00000226132 579 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Mir202-201ENSMUST00000083568 72 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf3Q99LI7 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Mir105-201ENSMUST00000104655 80 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm14677-201ENSMUST00000117866 486 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm14238-201ENSMUST00000120227 323 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm13932-201ENSMUST00000120873 610 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm14577-201ENSMUST00000121134 256 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm14303-201ENSMUST00000121320 171 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm26034-201ENSMUST00000158154 116 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm38008-201ENSMUST00000195333 518 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm42999-201ENSMUST00000198049 786 ntBASIC4.29□□□□□ -1.72
Cstf3Q99LI7 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms