Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm23481-201ENSMUST00000104173 131 ntBASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm13155-201ENSMUST00000119277 646 ntBASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm6373-201ENSMUST00000121026 360 ntBASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm11350-201ENSMUST00000121436 870 ntBASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm8178-201ENSMUST00000121570 646 ntBASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm14977-201ENSMUST00000121626 812 ntBASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Snora81-201ENSMUST00000157310 178 ntBASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm10067-201ENSMUST00000179462 348 ntBASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm28625-201ENSMUST00000188309 205 ntBASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm29815-201ENSMUST00000202418 178 ntBASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm18194-201ENSMUST00000210455 481 ntBASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 AC164424.1-201ENSMUST00000221690 170 ntBASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cchcr1Q8K2I2 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC4.46□□□□□ -1.69
Cchcr1Q8K2I2 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gm14299-201ENSMUST00000117586 397 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gm13687-201ENSMUST00000119857 282 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gm14605-201ENSMUST00000120599 268 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gm6969-201ENSMUST00000140065 342 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gm26028-201ENSMUST00000158660 294 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Mir3104-201ENSMUST00000174911 63 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Mir6960-201ENSMUST00000183449 61 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Mir6345-201ENSMUST00000184286 128 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gm44343-201ENSMUST00000196702 90 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gm45474-201ENSMUST00000209471 408 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Gm24319-201ENSMUST00000083389 107 ntBASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cchcr1Q8K2I2 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm15933-201ENSMUST00000117215 616 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm13650-201ENSMUST00000117729 433 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm12873-201ENSMUST00000119988 422 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm23585-201ENSMUST00000157656 102 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm26460-201ENSMUST00000175061 126 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm29320-201ENSMUST00000185235 615 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm28471-201ENSMUST00000185994 615 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm29179-202ENSMUST00000186138 615 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm28598-201ENSMUST00000186490 615 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm29448-201ENSMUST00000186675 615 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm29314-201ENSMUST00000186800 615 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm28615-201ENSMUST00000187527 482 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm28253-202ENSMUST00000187971 615 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm29268-201ENSMUST00000188669 615 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm29169-201ENSMUST00000189835 615 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm29218-205ENSMUST00000190846 615 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm28978-201ENSMUST00000191120 615 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm37172-201ENSMUST00000191926 615 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm8703-201ENSMUST00000203793 730 ntBASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
Cchcr1Q8K2I2 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms