Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Brf1Q8CFK2 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Mir5106-201ENSMUST00000174936 73 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm22243-201ENSMUST00000178754 120 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm28412-201ENSMUST00000187243 177 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm8599-201ENSMUST00000193033 457 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm22897-201ENSMUST00000197860 128 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm6051-201ENSMUST00000201529 352 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 CT030662.1-201ENSMUST00000227380 232 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Brf1Q8CFK2 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Gm22473-201ENSMUST00000104114 132 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Gm22591-201ENSMUST00000104243 106 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Gm11584-201ENSMUST00000120636 325 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Gm23032-201ENSMUST00000157995 107 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Gm18667-201ENSMUST00000186523 484 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Gm42164-201ENSMUST00000198881 379 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Gm44259-201ENSMUST00000204996 298 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Gm18645-201ENSMUST00000209593 651 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Gm45499-201ENSMUST00000211656 280 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 AC154747.1-201ENSMUST00000225265 239 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.44□□□□□ -1.54
Brf1Q8CFK2 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Brf1Q8CFK2 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm11898-201ENSMUST00000117161 385 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm14516-201ENSMUST00000120012 252 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm15038-201ENSMUST00000122144 296 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm26652-202ENSMUST00000181672 475 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Mir7j-201ENSMUST00000184427 122 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms