Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm12427-201ENSMUST00000117719 302 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm4732-201ENSMUST00000118778 473 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm14103-201ENSMUST00000119075 366 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm5379-201ENSMUST00000120973 826 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm23902-201ENSMUST00000157571 134 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm29634-201ENSMUST00000188467 696 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm28699-201ENSMUST00000189193 696 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm38214-201ENSMUST00000192581 988 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm37993-201ENSMUST00000195301 988 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm19269-201ENSMUST00000211401 804 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm34005-201ENSMUST00000215834 282 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 AC140210.1-201ENSMUST00000224961 534 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm26064-201ENSMUST00000083381 109 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm23226-201ENSMUST00000116927 103 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm20673-201ENSMUST00000177167 430 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm18547-201ENSMUST00000192439 811 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm43649-201ENSMUST00000196596 391 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm6303-201ENSMUST00000210123 471 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm36247-201ENSMUST00000211834 285 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm31931-201ENSMUST00000219666 222 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm18704-201ENSMUST00000219736 446 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 AC159242.1-201ENSMUST00000225832 194 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.8□□□□□ -1.64
Nup88Q8CEC0 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.8□□□□□ -1.64
Nup88Q8CEC0 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm25313-201ENSMUST00000101817 116 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Mir147-201ENSMUST00000102354 79 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm14365-201ENSMUST00000117535 587 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm6584-201ENSMUST00000119671 447 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm11575-201ENSMUST00000122243 228 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm23287-201ENSMUST00000179427 116 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm25942-201ENSMUST00000180080 110 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm23143-201ENSMUST00000180137 116 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm7634-201ENSMUST00000185778 553 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm8498-201ENSMUST00000188227 974 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm9775-201ENSMUST00000189402 331 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm33973-201ENSMUST00000195148 534 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm43855-201ENSMUST00000197462 507 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.79□□□□□ -1.64
Nup88Q8CEC0 Gm44954-201ENSMUST00000208513 227 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms