Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm27899-201ENSMUST00000184715 64 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Gm27564-201ENSMUST00000185196 96 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Gm29634-201ENSMUST00000188467 696 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Gm28699-201ENSMUST00000189193 696 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Gm45523-201ENSMUST00000210712 799 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Gm17820-201ENSMUST00000220213 1068 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Gm7093-201ENSMUST00000223004 581 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 AC158392.1-201ENSMUST00000223720 1069 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Gm23975-201ENSMUST00000082685 106 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Ccdc40Q8BI79 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Gm23226-201ENSMUST00000116927 103 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Gm13733-201ENSMUST00000117290 535 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Gm13314-201ENSMUST00000118742 335 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Gm12466-201ENSMUST00000121199 620 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Gm12358-201ENSMUST00000121842 520 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Gm16060-201ENSMUST00000153140 478 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Gm3084-201ENSMUST00000169967 598 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Mir6410-201ENSMUST00000184204 104 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Gm36964-201ENSMUST00000191876 198 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Gm44023-201ENSMUST00000203710 469 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Gm18320-201ENSMUST00000211304 595 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 AC160970.1-201ENSMUST00000219311 475 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc40Q8BI79 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Ccdc40Q8BI79 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Ccdc40Q8BI79 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Ccdc40Q8BI79 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm22194-201ENSMUST00000116869 95 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm1866-201ENSMUST00000120701 477 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Clec2f-201ENSMUST00000121051 374 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm12340-201ENSMUST00000121617 462 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm23465-201ENSMUST00000157134 262 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm24939-201ENSMUST00000158325 137 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm26915-201ENSMUST00000183080 748 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm9541-201ENSMUST00000188409 502 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm18984-201ENSMUST00000193998 1124 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm44583-201ENSMUST00000207478 281 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm46327-201ENSMUST00000218240 365 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ccdc40Q8BI79 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm6215-201ENSMUST00000119297 1386 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms