Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Vsx2Q61412 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Vsx2Q61412 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Vsx2Q61412 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Vsx2Q61412 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Vsx2Q61412 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.68□□□□□ -1.82
Vsx2Q61412 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.68□□□□□ -1.82
Vsx2Q61412 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Vsx2Q61412 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Vsx2Q61412 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3.67□□□□□ -1.82
Vsx2Q61412 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.67□□□□□ -1.82
Vsx2Q61412 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Vsx2Q61412 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Vsx2Q61412 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Vsx2Q61412 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Vsx2Q61412 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm25169-201ENSMUST00000104190 129 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm12467-201ENSMUST00000117625 745 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm13831-201ENSMUST00000118764 302 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm15364-201ENSMUST00000119618 585 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm12577-201ENSMUST00000119701 574 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm6461-201ENSMUST00000120015 633 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm23116-201ENSMUST00000158481 67 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm23702-201ENSMUST00000158840 130 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm10357-201ENSMUST00000159886 264 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Vsx2Q61412 Mir5710-201ENSMUST00000176884 69 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm6625-201ENSMUST00000177870 272 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Mir713-201ENSMUST00000178651 108 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm29408-201ENSMUST00000187536 216 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Vsx2Q61412 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC3.67□□□□□ -1.82
Vsx2Q61412 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm34272-201ENSMUST00000208886 253 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC3.67□□□□□ -1.82
Vsx2Q61412 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC3.67□□□□□ -1.82
Vsx2Q61412 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Vsx2Q61412 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Vsx2Q61412 Gm23677-201ENSMUST00000083156 104 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Mir129-2-201ENSMUST00000083577 90 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Vsx2Q61412 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Vsx2Q61412 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.67□□□□□ -1.82
Vsx2Q61412 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Vsx2Q61412 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Vsx2Q61412 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Vsx2Q61412 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Vsx2Q61412 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Vsx2Q61412 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Vsx2Q61412 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm14890-201ENSMUST00000117660 676 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm5943-201ENSMUST00000119458 459 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm13737-201ENSMUST00000119793 232 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm13687-201ENSMUST00000119857 282 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm13868-201ENSMUST00000122411 294 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm26276-201ENSMUST00000157099 109 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm25966-201ENSMUST00000157169 117 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm23959-201ENSMUST00000157208 324 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm23782-201ENSMUST00000157939 120 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Vsx2Q61412 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.66□□□□□ -1.82
Vsx2Q61412 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm28598-201ENSMUST00000186490 615 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm29281-201ENSMUST00000188077 381 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm29268-201ENSMUST00000188669 615 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm29218-205ENSMUST00000190846 615 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm28978-201ENSMUST00000191120 615 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm37172-201ENSMUST00000191926 615 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm38053-201ENSMUST00000193938 160 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm38332-201ENSMUST00000194189 147 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.66□□□□□ -1.82
Vsx2Q61412 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Vsx2Q61412 Mir132-201ENSMUST00000083603 66 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Vsx2Q61412 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Vsx2Q61412 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.66□□□□□ -1.82
Vsx2Q61412 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Vsx2Q61412 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Vsx2Q61412 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Vsx2Q61412 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Vsx2Q61412 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Vsx2Q61412 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Vsx2Q61412 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.65□□□□□ -1.82
Vsx2Q61412 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Vsx2Q61412 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Vsx2Q61412 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.65□□□□□ -1.83
Vsx2Q61412 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Vsx2Q61412 Gm22488-201ENSMUST00000116811 127 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms