Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm44353-201ENSMUST00000200618 138 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CtcfQ61164 Gm45236-201ENSMUST00000208632 229 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CtcfQ61164 Gm45499-201ENSMUST00000211656 280 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 Gm18442-201ENSMUST00000220925 639 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 AC140210.1-201ENSMUST00000224961 534 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 CT571256.1-201ENSMUST00000226045 585 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CtcfQ61164 Gm6863-201ENSMUST00000052882 636 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
CtcfQ61164 Mir504-201ENSMUST00000093602 79 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.78□□□□□ -1.64
CtcfQ61164 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CtcfQ61164 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CtcfQ61164 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CtcfQ61164 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CtcfQ61164 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CtcfQ61164 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CtcfQ61164 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
CtcfQ61164 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CtcfQ61164 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CtcfQ61164 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Gm11575-201ENSMUST00000122243 228 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CtcfQ61164 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CtcfQ61164 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC4.77□□□□□ -1.65
CtcfQ61164 Gm25185-201ENSMUST00000157754 96 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.77□□□□□ -1.65
CtcfQ61164 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.77□□□□□ -1.65
CtcfQ61164 Rab26os-201ENSMUST00000176215 477 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CtcfQ61164 Gm5558-201ENSMUST00000178933 495 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Gm25120-201ENSMUST00000180148 79 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Gm21856-201ENSMUST00000187547 696 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CtcfQ61164 Gm38221-201ENSMUST00000195146 365 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.77□□□□□ -1.65
CtcfQ61164 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC4.77□□□□□ -1.65
CtcfQ61164 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Gm4714-201ENSMUST00000203395 279 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC4.77□□□□□ -1.65
CtcfQ61164 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CtcfQ61164 Gm44543-201ENSMUST00000209136 396 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Gm45409-201ENSMUST00000211486 252 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.77□□□□□ -1.65
CtcfQ61164 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
CtcfQ61164 Gm19572-201ENSMUST00000214326 338 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Gm29785-201ENSMUST00000217033 383 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Gm19599-201ENSMUST00000218898 358 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.77□□□□□ -1.65
CtcfQ61164 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 AC133654.1-201ENSMUST00000228411 672 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CtcfQ61164 Gm23975-201ENSMUST00000082685 106 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CtcfQ61164 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC4.77□□□□□ -1.65
CtcfQ61164 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CtcfQ61164 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CtcfQ61164 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CtcfQ61164 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CtcfQ61164 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.77□□□□□ -1.65
CtcfQ61164 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.77□□□□□ -1.65
CtcfQ61164 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CtcfQ61164 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
CtcfQ61164 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CtcfQ61164 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CtcfQ61164 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CtcfQ61164 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
CtcfQ61164 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
CtcfQ61164 Gm15125-201ENSMUST00000116185 800 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Gm16053-201ENSMUST00000120511 188 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Gm15168-201ENSMUST00000121057 316 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.76□□□□□ -1.65
CtcfQ61164 Gm22186-201ENSMUST00000157822 122 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Gm17655-201ENSMUST00000167969 255 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CtcfQ61164 Zfp950-206ENSMUST00000178819 171 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CtcfQ61164 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CtcfQ61164 Gm9687-201ENSMUST00000189312 602 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC4.76□□□□□ -1.65
CtcfQ61164 Gm18382-201ENSMUST00000194394 582 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms