Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.67□□□□□ -1.66
Trim58Q5NCC9 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Gm20399-201ENSMUST00000174652 132 ntBASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Trim58Q5NCC9 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Gm27189-201ENSMUST00000184119 190 ntBASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.67□□□□□ -1.66
Trim58Q5NCC9 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Gm18445-201ENSMUST00000195502 774 ntBASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Gm5885-202ENSMUST00000203357 528 ntBASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Gm6929-201ENSMUST00000210930 468 ntBASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Gm18016-201ENSMUST00000216119 801 ntBASIC4.67□□□□□ -1.66
Trim58Q5NCC9 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim58Q5NCC9 AC139294.2-201ENSMUST00000227159 285 ntBASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Gm25099-201ENSMUST00000093716 116 ntBASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.67□□□□□ -1.66
Trim58Q5NCC9 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm23424-201ENSMUST00000103889 110 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm15933-201ENSMUST00000117215 616 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm11869-201ENSMUST00000118701 329 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm14788-201ENSMUST00000119457 375 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm15387-201ENSMUST00000120421 648 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm15061-201ENSMUST00000121076 1046 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm15780-201ENSMUST00000121283 935 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm23816-201ENSMUST00000179617 132 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm21070-201ENSMUST00000182425 985 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm27445-201ENSMUST00000184484 72 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm37996-201ENSMUST00000191859 367 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm19030-201ENSMUST00000194947 552 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm37791-201ENSMUST00000195081 286 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm45789-201ENSMUST00000213038 364 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 AC134254.4-201ENSMUST00000223086 370 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm5518-201ENSMUST00000084171 648 ntBASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trim58Q5NCC9 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Trim58Q5NCC9 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Trim58Q5NCC9 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm22493-201ENSMUST00000104494 132 ntBASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm11372-201ENSMUST00000117348 570 ntBASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm26354-201ENSMUST00000158221 129 ntBASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Snord92-201ENSMUST00000175548 85 ntBASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm26746-201ENSMUST00000181722 487 ntBASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm44650-201ENSMUST00000206929 194 ntBASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm45796-201ENSMUST00000212483 114 ntBASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Snord15a-201ENSMUST00000083888 148 ntBASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.65□□□□□ -1.67
Trim58Q5NCC9 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim58Q5NCC9 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms