Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm10287-202ENSMUST00000180599 4059 ntBASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 Gm14534-201ENSMUST00000120045 357 ntBASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 Gm11761-201ENSMUST00000121392 445 ntBASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 Gm11349-201ENSMUST00000122209 1116 ntBASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc88bQ4QRL3 Gm43032-201ENSMUST00000197967 3123 ntBASIC5.94□□□□□ -1.46
Ccdc88bQ4QRL3 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC5.94□□□□□ -1.46
Ccdc88bQ4QRL3 Gm14825-201ENSMUST00000113538 701 ntBASIC5.94□□□□□ -1.46
Ccdc88bQ4QRL3 Gm11673-201ENSMUST00000117846 331 ntBASIC5.94□□□□□ -1.46
Ccdc88bQ4QRL3 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC5.94□□□□□ -1.46
Ccdc88bQ4QRL3 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc88bQ4QRL3 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc88bQ4QRL3 AC107864.1-201ENSMUST00000217937 496 ntBASIC5.94□□□□□ -1.46
Ccdc88bQ4QRL3 AC152062.1-201ENSMUST00000218129 386 ntBASIC5.94□□□□□ -1.46
Ccdc88bQ4QRL3 AC174797.3-202ENSMUST00000224578 587 ntBASIC5.94□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Ccdc88bQ4QRL3 Gm37742-201ENSMUST00000193263 3979 ntBASIC5.94□□□□□ -1.46
Ccdc88bQ4QRL3 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Gm34005-201ENSMUST00000215834 282 ntBASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.93□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 AC163296.2-201ENSMUST00000220177 1315 ntBASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Gm23609-201ENSMUST00000104542 127 ntBASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Gm12793-201ENSMUST00000119268 292 ntBASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Gm23257-201ENSMUST00000158322 132 ntBASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Mir3103-201ENSMUST00000175474 67 ntBASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Gm18330-201ENSMUST00000199246 547 ntBASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 AC159193.2-201ENSMUST00000220865 4251 ntBASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC5.92□□□□□ -1.46
Ccdc88bQ4QRL3 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Gm12902-201ENSMUST00000118389 322 ntBASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Gm7837-201ENSMUST00000190873 412 ntBASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Gm5176-201ENSMUST00000218244 1227 ntBASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 AC155929.1-201ENSMUST00000220217 1276 ntBASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Gm37747-201ENSMUST00000193717 4003 ntBASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc88bQ4QRL3 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Gm8244-201ENSMUST00000121254 264 ntBASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Gm16353-201ENSMUST00000159458 1223 ntBASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Gm26379-202ENSMUST00000200225 132 ntBASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Gm44966-201ENSMUST00000208096 157 ntBASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Gm24817-201ENSMUST00000093672 105 ntBASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Ccdc88bQ4QRL3 Gm24118-201ENSMUST00000103972 126 ntBASIC5.9□□□□□ -1.47
Ccdc88bQ4QRL3 Gm26145-201ENSMUST00000104476 127 ntBASIC5.9□□□□□ -1.47
Ccdc88bQ4QRL3 Gm13803-201ENSMUST00000117547 489 ntBASIC5.9□□□□□ -1.47
Ccdc88bQ4QRL3 Gm12722-201ENSMUST00000118507 493 ntBASIC5.9□□□□□ -1.47
Ccdc88bQ4QRL3 Gm15377-201ENSMUST00000119594 246 ntBASIC5.9□□□□□ -1.47
Ccdc88bQ4QRL3 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC5.9□□□□□ -1.47
Ccdc88bQ4QRL3 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC5.9□□□□□ -1.47
Ccdc88bQ4QRL3 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC5.9□□□□□ -1.47
Ccdc88bQ4QRL3 Gm37575-201ENSMUST00000195467 309 ntBASIC5.9□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms