Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm26996-201ENSMUST00000204418 1359 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Mir92b-201ENSMUST00000102300 83 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm14816-201ENSMUST00000117174 294 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm13607-201ENSMUST00000117875 539 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm15766-201ENSMUST00000118025 813 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm14388-201ENSMUST00000118119 477 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm14750-201ENSMUST00000118262 516 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm5123-201ENSMUST00000121905 837 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm5755-201ENSMUST00000152394 837 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm24444-201ENSMUST00000157244 308 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm25713-201ENSMUST00000158625 109 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm24754-201ENSMUST00000177997 107 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm29634-201ENSMUST00000188467 696 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm28699-201ENSMUST00000189193 696 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm37219-201ENSMUST00000192036 926 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Mir703-201ENSMUST00000197105 109 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm43992-201ENSMUST00000204358 197 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm17737-201ENSMUST00000210183 1147 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm30738-201ENSMUST00000221346 502 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm23464-201ENSMUST00000083145 147 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm26064-201ENSMUST00000083381 109 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Trim40Q3UWA4 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Lipe-203ENSMUST00000105177 1251 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm14771-201ENSMUST00000118249 203 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm14713-201ENSMUST00000122362 686 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm23231-201ENSMUST00000157299 104 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm16490-201ENSMUST00000165299 351 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm5372-201ENSMUST00000187540 409 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm7182-201ENSMUST00000193351 732 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm38332-201ENSMUST00000194189 147 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm38221-201ENSMUST00000195146 365 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm44395-201ENSMUST00000197056 153 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm17775-201ENSMUST00000198542 258 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm43116-201ENSMUST00000199789 195 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm5876-201ENSMUST00000203735 243 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms