Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm24522-201ENSMUST00000083964 108 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm14670-201ENSMUST00000117327 337 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm13785-201ENSMUST00000119099 690 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm9078-201ENSMUST00000119126 617 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm15266-201ENSMUST00000119635 255 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm7071-201ENSMUST00000120458 462 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm22452-201ENSMUST00000122804 104 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm26490-201ENSMUST00000157879 140 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm23964-201ENSMUST00000157966 107 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm23032-201ENSMUST00000157995 107 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm24734-201ENSMUST00000158860 262 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm24949-201ENSMUST00000183609 215 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm5058-201ENSMUST00000187331 463 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm2077-201ENSMUST00000195017 319 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm37095-201ENSMUST00000195421 205 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm8874-201ENSMUST00000196826 286 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm9173-201ENSMUST00000198054 400 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 AC152951.1-201ENSMUST00000218907 266 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 AC120540.1-201ENSMUST00000221879 324 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 CR974485.1-201ENSMUST00000222408 402 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 CT030135.1-201ENSMUST00000223760 570 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm7204-201ENSMUST00000062591 600 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp39Q3TIX9 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm22778-201ENSMUST00000104090 128 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Mir467h-201ENSMUST00000116759 121 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm12717-201ENSMUST00000118427 983 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm16445-201ENSMUST00000120399 714 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm5646-201ENSMUST00000120568 714 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm25389-201ENSMUST00000157340 286 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm23993-201ENSMUST00000157478 144 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm23024-201ENSMUST00000158770 292 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm24225-201ENSMUST00000158825 98 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm17030-201ENSMUST00000167016 393 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm10074-201ENSMUST00000174543 249 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm15143-201ENSMUST00000178180 714 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm34176-201ENSMUST00000192621 474 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm42542-201ENSMUST00000197978 268 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm44431-201ENSMUST00000203500 413 ntBASIC4.85□□□□□ -1.63
Usp39Q3TIX9 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms