Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.68□□□□□ -1.66
Col8a1Q00780 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col8a1Q00780 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm31931-201ENSMUST00000219666 222 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 AC154354.1-201ENSMUST00000224585 2109 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 AC167192.2-201ENSMUST00000224794 198 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 AC102291.2-201ENSMUST00000228083 367 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm23624-201ENSMUST00000082463 321 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm24706-201ENSMUST00000082806 137 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm38372-201ENSMUST00000194854 4028 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm43924-201ENSMUST00000204851 1736 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC4.68□□□□□ -1.66
Col8a1Q00780 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Col8a1Q00780 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col8a1Q00780 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC4.68□□□□□ -1.66
Col8a1Q00780 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC4.68□□□□□ -1.66
Col8a1Q00780 AC130827.1-201ENSMUST00000220476 3850 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm11290-204ENSMUST00000224688 3042 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col8a1Q00780 AC117769.3-201ENSMUST00000225814 1664 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm43485-201ENSMUST00000199292 1710 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Mir466b-8-201ENSMUST00000103883 86 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm7421-201ENSMUST00000119298 639 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm6062-201ENSMUST00000120462 631 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm7365-201ENSMUST00000120877 639 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm12340-201ENSMUST00000121617 462 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm23700-201ENSMUST00000158842 102 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm22411-201ENSMUST00000175462 126 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm22002-201ENSMUST00000175622 125 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm26556-201ENSMUST00000180645 320 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm27754-201ENSMUST00000183340 126 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Mir6410-201ENSMUST00000184204 104 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm2914-201ENSMUST00000186120 328 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm28408-201ENSMUST00000191557 463 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm37658-201ENSMUST00000192672 315 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm32175-201ENSMUST00000193641 346 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm37743-201ENSMUST00000194645 376 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm43115-201ENSMUST00000196244 160 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm43043-201ENSMUST00000196579 412 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Mir466e-201ENSMUST00000198862 84 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Mir466c-1-201ENSMUST00000200654 84 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm44161-201ENSMUST00000203532 253 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm43919-201ENSMUST00000204303 364 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm7990-201ENSMUST00000212126 593 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm46996-201ENSMUST00000220924 408 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm35558-203ENSMUST00000222264 204 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col8a1Q00780 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col8a1Q00780 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 AC156031.1-201ENSMUST00000217288 2555 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms