Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm26128-201ENSMUST00000083170 110 ntBASIC5.17□□□□□ -1.58
SgcbP82349 Mir342-201ENSMUST00000083502 99 ntBASIC5.17□□□□□ -1.58
SgcbP82349 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.17□□□□□ -1.58
SgcbP82349 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SgcbP82349 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.17□□□□□ -1.58
SgcbP82349 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SgcbP82349 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.17□□□□□ -1.58
SgcbP82349 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SgcbP82349 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SgcbP82349 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SgcbP82349 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.17□□□□□ -1.58
SgcbP82349 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SgcbP82349 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.17□□□□□ -1.58
SgcbP82349 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SgcbP82349 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SgcbP82349 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SgcbP82349 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
SgcbP82349 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SgcbP82349 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SgcbP82349 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SgcbP82349 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SgcbP82349 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Gm11229-201ENSMUST00000121993 437 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.16□□□□□ -1.58
SgcbP82349 Gm23169-201ENSMUST00000157157 112 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Gm23225-201ENSMUST00000158121 114 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Gm3531-201ENSMUST00000162698 489 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.16□□□□□ -1.58
SgcbP82349 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.16□□□□□ -1.58
SgcbP82349 Mir7220-201ENSMUST00000183978 60 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.16□□□□□ -1.58
SgcbP82349 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Gm28872-201ENSMUST00000191518 158 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Gm2147-201ENSMUST00000193588 639 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Gm43467-201ENSMUST00000197441 437 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Gm44768-201ENSMUST00000205719 393 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.16□□□□□ -1.58
SgcbP82349 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.16□□□□□ -1.58
SgcbP82349 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.16□□□□□ -1.58
SgcbP82349 Gm4510-201ENSMUST00000218265 427 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Gm7042-201ENSMUST00000223027 384 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Gm24029-201ENSMUST00000083928 143 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.16□□□□□ -1.58
SgcbP82349 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SgcbP82349 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SgcbP82349 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SgcbP82349 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.16□□□□□ -1.58
SgcbP82349 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SgcbP82349 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SgcbP82349 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SgcbP82349 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SgcbP82349 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SgcbP82349 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SgcbP82349 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SgcbP82349 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SgcbP82349 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.15□□□□□ -1.58
SgcbP82349 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
SgcbP82349 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
SgcbP82349 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SgcbP82349 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SgcbP82349 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
SgcbP82349 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SgcbP82349 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.15□□□□□ -1.58
SgcbP82349 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.15□□□□□ -1.58
SgcbP82349 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.15□□□□□ -1.58
SgcbP82349 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SgcbP82349 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SgcbP82349 Gm24889-201ENSMUST00000104388 132 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Gm22372-201ENSMUST00000104589 136 ntBASIC5.15□□□□□ -1.59
SgcbP82349 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SgcbP82349 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Gm15267-201ENSMUST00000120888 464 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Gm15801-201ENSMUST00000120920 522 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Gm14578-201ENSMUST00000122166 391 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.15□□□□□ -1.59
SgcbP82349 Gm6081-201ENSMUST00000134472 489 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SgcbP82349 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SgcbP82349 Gm24719-201ENSMUST00000157520 110 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Gm26348-201ENSMUST00000157528 240 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Gm22383-201ENSMUST00000158188 327 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Gm8783-201ENSMUST00000159764 522 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC5.15□□□□□ -1.59
SgcbP82349 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Gm24957-201ENSMUST00000179604 132 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Gm24518-201ENSMUST00000180275 94 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Gm27490-201ENSMUST00000184754 128 ntBASIC5.15□□□□□ -1.59
SgcbP82349 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SgcbP82349 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.15□□□□□ -1.59
SgcbP82349 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.15□□□□□ -1.59
SgcbP82349 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.15□□□□□ -1.59
SgcbP82349 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.15□□□□□ -1.59
SgcbP82349 Gm37336-202ENSMUST00000193705 468 ntBASIC5.15□□□□□ -1.59
SgcbP82349 Ighv1-40-201ENSMUST00000194231 345 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms