Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.5□□□□□ -1.53
Cux1P53564 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC5.5□□□□□ -1.53
Cux1P53564 Gm8244-201ENSMUST00000121254 264 ntBASIC5.5□□□□□ -1.53
Cux1P53564 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC5.5□□□□□ -1.53
Cux1P53564 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cux1P53564 Gm23257-201ENSMUST00000158322 132 ntBASIC5.5□□□□□ -1.53
Cux1P53564 Mir5128-201ENSMUST00000175217 84 ntBASIC5.5□□□□□ -1.53
Cux1P53564 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.5□□□□□ -1.53
Cux1P53564 Gm44600-201ENSMUST00000208540 111 ntBASIC5.5□□□□□ -1.53
Cux1P53564 Gm37747-201ENSMUST00000193717 4003 ntBASIC5.5□□□□□ -1.53
Cux1P53564 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.5□□□□□ -1.53
Cux1P53564 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cux1P53564 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cux1P53564 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cux1P53564 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cux1P53564 Gm5983-201ENSMUST00000197739 770 ntBASIC5.49□□□□□ -1.53
Cux1P53564 Gm7624-201ENSMUST00000209702 435 ntBASIC5.49□□□□□ -1.53
Cux1P53564 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.49□□□□□ -1.53
Cux1P53564 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Cux1P53564 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Cux1P53564 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cux1P53564 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cux1P53564 Gm37204-201ENSMUST00000192389 3961 ntBASIC5.49□□□□□ -1.53
Cux1P53564 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Cux1P53564 Gm13310-201ENSMUST00000120962 1381 ntBASIC5.49□□□□□ -1.53
Cux1P53564 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cux1P53564 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC5.49□□□□□ -1.53
Cux1P53564 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cux1P53564 Gm12025-201ENSMUST00000117768 144 ntBASIC5.48□□□□□ -1.53
Cux1P53564 Gm23755-201ENSMUST00000157578 343 ntBASIC5.48□□□□□ -1.53
Cux1P53564 Gm7634-201ENSMUST00000185778 553 ntBASIC5.48□□□□□ -1.53
Cux1P53564 Gm29104-201ENSMUST00000186304 222 ntBASIC5.48□□□□□ -1.53
Cux1P53564 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cux1P53564 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Cux1P53564 Gm39147-201ENSMUST00000211376 465 ntBASIC5.48□□□□□ -1.53
Cux1P53564 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.48□□□□□ -1.53
Cux1P53564 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Cux1P53564 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.48□□□□□ -1.53
Cux1P53564 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Cux1P53564 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Cux1P53564 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.48□□□□□ -1.53
Cux1P53564 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.48□□□□□ -1.53
Cux1P53564 Gm24675-201ENSMUST00000158757 259 ntBASIC5.48□□□□□ -1.53
Cux1P53564 Gm16300-201ENSMUST00000160031 1279 ntBASIC5.48□□□□□ -1.53
Cux1P53564 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.48□□□□□ -1.53
Cux1P53564 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC5.48□□□□□ -1.53
Cux1P53564 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC5.48□□□□□ -1.53
Cux1P53564 Gm8106-201ENSMUST00000213123 523 ntBASIC5.48□□□□□ -1.53
Cux1P53564 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Cux1P53564 Gm44625-201ENSMUST00000207838 1561 ntBASIC5.48□□□□□ -1.53
Cux1P53564 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Cux1P53564 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cux1P53564 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Cux1P53564 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.47□□□□□ -1.53
Cux1P53564 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cux1P53564 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cux1P53564 Gm23697-201ENSMUST00000103897 110 ntBASIC5.47□□□□□ -1.53
Cux1P53564 Gm14811-201ENSMUST00000117070 117 ntBASIC5.47□□□□□ -1.53
Cux1P53564 Gm15142-201ENSMUST00000121013 856 ntBASIC5.47□□□□□ -1.53
Cux1P53564 Gm11896-201ENSMUST00000121105 820 ntBASIC5.47□□□□□ -1.53
Cux1P53564 Gm12998-201ENSMUST00000122445 789 ntBASIC5.47□□□□□ -1.53
Cux1P53564 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.47□□□□□ -1.53
Cux1P53564 Gm23231-201ENSMUST00000157299 104 ntBASIC5.47□□□□□ -1.53
Cux1P53564 Gm28390-201ENSMUST00000185212 700 ntBASIC5.47□□□□□ -1.53
Cux1P53564 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC5.47□□□□□ -1.53
Cux1P53564 Gm37085-201ENSMUST00000193780 196 ntBASIC5.47□□□□□ -1.53
Cux1P53564 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Cux1P53564 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Cux1P53564 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC5.47□□□□□ -1.53
Cux1P53564 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Cux1P53564 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Cux1P53564 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Cux1P53564 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.46□□□□□ -1.54
Cux1P53564 Gm24289-201ENSMUST00000157629 135 ntBASIC5.46□□□□□ -1.54
Cux1P53564 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cux1P53564 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cux1P53564 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cux1P53564 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cux1P53564 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Cux1P53564 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.46□□□□□ -1.54
Cux1P53564 Gm5829-201ENSMUST00000191383 351 ntBASIC5.46□□□□□ -1.54
Cux1P53564 Gm28655-201ENSMUST00000191538 692 ntBASIC5.46□□□□□ -1.54
Cux1P53564 AC107864.1-201ENSMUST00000217937 496 ntBASIC5.46□□□□□ -1.54
Cux1P53564 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.46□□□□□ -1.54
Cux1P53564 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Cux1P53564 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Cux1P53564 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Cux1P53564 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.45□□□□□ -1.54
Cux1P53564 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Cux1P53564 Gm25407-201ENSMUST00000104102 134 ntBASIC5.45□□□□□ -1.54
Cux1P53564 Gm23747-201ENSMUST00000104228 131 ntBASIC5.45□□□□□ -1.54
Cux1P53564 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Cux1P53564 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.45□□□□□ -1.54
Cux1P53564 Mir504-201ENSMUST00000093602 79 ntBASIC5.45□□□□□ -1.54
Cux1P53564 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.45□□□□□ -1.54
Cux1P53564 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Cux1P53564 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Cux1P53564 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Cux1P53564 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Cux1P53564 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms