Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Shmt1P50431 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm15266-201ENSMUST00000119635 255 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Shmt1P50431 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm13131-201ENSMUST00000122228 321 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Mup-ps12-201ENSMUST00000126217 549 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm3362-201ENSMUST00000148102 466 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm24931-201ENSMUST00000158324 107 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm17030-201ENSMUST00000167016 393 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm21729-201ENSMUST00000180058 664 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm21853-201ENSMUST00000180071 664 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm27428-201ENSMUST00000184289 110 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm29495-201ENSMUST00000189319 664 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Shmt1P50431 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm6719-201ENSMUST00000202067 335 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Shmt1P50431 AC161520.1-201ENSMUST00000210954 939 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.13□□□□□ -1.59
Shmt1P50431 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm8158-201ENSMUST00000219220 465 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm8112-201ENSMUST00000219637 465 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 AC139376.1-201ENSMUST00000220056 1250 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 AC109172.2-201ENSMUST00000228792 381 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm12582-201ENSMUST00000030555 697 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Shmt1P50431 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Shmt1P50431 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Shmt1P50431 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Shmt1P50431 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Shmt1P50431 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Shmt1P50431 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.13□□□□□ -1.59
Shmt1P50431 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Shmt1P50431 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Shmt1P50431 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.13□□□□□ -1.59
Shmt1P50431 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Shmt1P50431 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.13□□□□□ -1.59
Shmt1P50431 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Shmt1P50431 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Shmt1P50431 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
Shmt1P50431 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Shmt1P50431 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Shmt1P50431 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Shmt1P50431 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Shmt1P50431 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Shmt1P50431 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
Shmt1P50431 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Shmt1P50431 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Shmt1P50431 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Shmt1P50431 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Shmt1P50431 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Shmt1P50431 Gm24469-201ENSMUST00000104487 131 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm22899-201ENSMUST00000104540 131 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm7974-201ENSMUST00000117154 408 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm12492-201ENSMUST00000117665 564 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm12328-201ENSMUST00000118611 197 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm12704-201ENSMUST00000119789 464 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm12237-201ENSMUST00000120158 470 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm6373-201ENSMUST00000121026 360 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.12□□□□□ -1.59
Shmt1P50431 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Shmt1P50431 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Shmt1P50431 Gm9593-201ENSMUST00000166034 469 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Shmt1P50431 Gm17060-201ENSMUST00000172394 824 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Shmt1P50431 Gm26828-201ENSMUST00000180640 172 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Mir6951-201ENSMUST00000183910 75 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Shmt1P50431 Gm43505-201ENSMUST00000200579 139 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm32308-201ENSMUST00000203053 280 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm4714-201ENSMUST00000203395 279 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.12□□□□□ -1.59
Shmt1P50431 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Shmt1P50431 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Shmt1P50431 Gm19232-201ENSMUST00000211621 652 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm7128-201ENSMUST00000211639 533 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.12□□□□□ -1.59
Shmt1P50431 AC109212.1-201ENSMUST00000215561 427 ntBASIC5.12□□□□□ -1.59
Shmt1P50431 Gm8288-201ENSMUST00000223406 593 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms