Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm23774-201ENSMUST00000158990 131 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Mir3066-201ENSMUST00000175296 83 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx1P48377 Gm27820-201ENSMUST00000183628 175 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Gm43078-201ENSMUST00000197222 168 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC6.32□□□□□ -1.4
Rfx1P48377 Gm42850-201ENSMUST00000202094 201 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Gm10709-201ENSMUST00000213318 480 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 AC159621.1-201ENSMUST00000223249 163 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 AC167192.2-201ENSMUST00000224794 198 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Rfx1P48377 Mir19a-201ENSMUST00000083482 82 ntBASIC6.32□□□□□ -1.4
Rfx1P48377 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx1P48377 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx1P48377 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx1P48377 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Rfx1P48377 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC6.32□□□□□ -1.4
Rfx1P48377 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Rfx1P48377 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC6.31□□□□□ -1.4
Rfx1P48377 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rfx1P48377 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rfx1P48377 AC101945.4-201ENSMUST00000228464 1976 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx1P48377 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Rfx1P48377 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx1P48377 Gm12739-201ENSMUST00000119769 382 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 Gm12564-201ENSMUST00000119860 321 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 Gm11909-201ENSMUST00000121424 759 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 Gm13077-201ENSMUST00000121941 484 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx1P48377 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx1P48377 Gm28527-201ENSMUST00000185210 297 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 Ighv1-6-201ENSMUST00000193849 293 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC6.31□□□□□ -1.4
Rfx1P48377 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx1P48377 Gm45232-201ENSMUST00000207811 162 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Rfx1P48377 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC6.31□□□□□ -1.4
Rfx1P48377 Gm45588-201ENSMUST00000211213 630 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rfx1P48377 Gm19219-201ENSMUST00000215863 724 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.31□□□□□ -1.4
Rfx1P48377 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 Gm7753-201ENSMUST00000221007 867 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Rfx1P48377 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.31□□□□□ -1.4
Rfx1P48377 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Rfx1P48377 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Rfx1P48377 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rfx1P48377 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rfx1P48377 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Rfx1P48377 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Rfx1P48377 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx1P48377 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx1P48377 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Rfx1P48377 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Rfx1P48377 Gm37195-201ENSMUST00000192006 3018 ntBASIC6.31□□□□□ -1.4
Rfx1P48377 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC6.3□□□□□ -1.4
Rfx1P48377 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Rfx1P48377 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Rfx1P48377 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rfx1P48377 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Rfx1P48377 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.3□□□□□ -1.4
Rfx1P48377 AC147615.2-201ENSMUST00000219876 2154 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Gm37767-201ENSMUST00000193239 1834 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rfx1P48377 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rfx1P48377 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rfx1P48377 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Rfx1P48377 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Rfx1P48377 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Rfx1P48377 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC6.3□□□□□ -1.4
Rfx1P48377 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Rfx1P48377 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC6.3□□□□□ -1.4
Rfx1P48377 Mir5110-201ENSMUST00000175537 87 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Gm24957-201ENSMUST00000179604 132 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Mir6971-201ENSMUST00000183497 63 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rfx1P48377 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Rfx1P48377 Gm34768-201ENSMUST00000193884 565 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
Rfx1P48377 Gm42475-201ENSMUST00000201212 295 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Gm18541-201ENSMUST00000215935 538 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.3□□□□□ -1.4
Rfx1P48377 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Rfx1P48377 CT010486.1-201ENSMUST00000224609 422 ntBASIC6.3□□□□□ -1.4
Rfx1P48377 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Rfx1P48377 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Rfx1P48377 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms