Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm11746-201ENSMUST00000119843 821 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Gm14037-201ENSMUST00000120576 313 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Gm13557-201ENSMUST00000120771 382 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Gm5263-201ENSMUST00000163646 601 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Mir6907-201ENSMUST00000183764 71 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Gm29105-201ENSMUST00000187256 450 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.88□□□□□ -1.63
Traf1P39428 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.88□□□□□ -1.63
Traf1P39428 Gm43856-201ENSMUST00000197004 369 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Gm7468-201ENSMUST00000203900 652 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Gm3690-201ENSMUST00000211341 262 ntBASIC4.88□□□□□ -1.63
Traf1P39428 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.88□□□□□ -1.63
Traf1P39428 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Traf1P39428 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Traf1P39428 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.88□□□□□ -1.63
Traf1P39428 Gm12667-201ENSMUST00000118299 1332 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Traf1P39428 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.88□□□□□ -1.63
Traf1P39428 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Traf1P39428 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Traf1P39428 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Traf1P39428 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.88□□□□□ -1.63
Traf1P39428 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Traf1P39428 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Traf1P39428 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Mir92b-201ENSMUST00000102300 83 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Mir804-201ENSMUST00000103251 95 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm23226-201ENSMUST00000116927 103 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm15553-201ENSMUST00000118757 430 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm5942-201ENSMUST00000120046 439 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Mup-ps15-201ENSMUST00000121741 539 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm15274-201ENSMUST00000131442 291 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Traf1P39428 Gm21979-201ENSMUST00000139887 291 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm15259-201ENSMUST00000151262 291 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm26036-201ENSMUST00000158149 144 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm24773-201ENSMUST00000158513 99 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Traf1P39428 Gm43478-201ENSMUST00000200381 292 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm4501-201ENSMUST00000207330 551 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm4558-201ENSMUST00000207886 521 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm21089-201ENSMUST00000215843 325 ntBASIC4.87□□□□□ -1.63
Traf1P39428 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.87□□□□□ -1.63
Traf1P39428 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC4.87□□□□□ -1.63
Traf1P39428 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Traf1P39428 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Traf1P39428 Gm25799-201ENSMUST00000082643 107 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm23510-201ENSMUST00000083083 163 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm23846-201ENSMUST00000083835 107 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Traf1P39428 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Traf1P39428 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.87□□□□□ -1.63
Traf1P39428 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Traf1P39428 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Traf1P39428 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Traf1P39428 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Traf1P39428 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Traf1P39428 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Traf1P39428 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Traf1P39428 Gm22019-201ENSMUST00000104359 96 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm14656-201ENSMUST00000120342 502 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm16471-201ENSMUST00000121940 618 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm11344-201ENSMUST00000122011 335 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm23792-201ENSMUST00000122557 93 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm23228-201ENSMUST00000157296 270 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm23499-201ENSMUST00000157736 268 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm22314-201ENSMUST00000158007 281 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm24734-201ENSMUST00000158860 262 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
Traf1P39428 Mir5106-201ENSMUST00000174936 73 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm26219-201ENSMUST00000175216 71 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Traf1P39428 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm27254-201ENSMUST00000183926 517 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm36259-201ENSMUST00000197340 392 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm43559-201ENSMUST00000198755 466 ntBASIC4.86□□□□□ -1.63
Traf1P39428 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm8942-201ENSMUST00000217892 400 ntBASIC4.86□□□□□ -1.63
Traf1P39428 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.86□□□□□ -1.63
Traf1P39428 AC158392.1-201ENSMUST00000223720 1069 ntBASIC4.86□□□□□ -1.63
Traf1P39428 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Traf1P39428 Gm23455-201ENSMUST00000083331 100 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Gm26165-201ENSMUST00000083791 138 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Traf1P39428 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.86□□□□□ -1.63
Traf1P39428 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Traf1P39428 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Traf1P39428 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Traf1P39428 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Traf1P39428 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Traf1P39428 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Traf1P39428 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms