Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lire1P11260 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Lire1P11260 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Lire1P11260 Gm5777-201ENSMUST00000177265 448 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Mir6899-201ENSMUST00000184798 64 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm28574-201ENSMUST00000185757 699 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm28781-201ENSMUST00000185760 696 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm28339-201ENSMUST00000185845 696 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm29062-201ENSMUST00000186032 694 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm29574-201ENSMUST00000186226 696 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm28828-201ENSMUST00000186601 696 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm28057-201ENSMUST00000186603 615 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm28255-201ENSMUST00000187101 694 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm29307-201ENSMUST00000187367 696 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm28397-201ENSMUST00000187970 699 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm29634-201ENSMUST00000188467 696 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm28896-201ENSMUST00000188609 696 ntBASIC4.36□□□□□ -1.71
Lire1P11260 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Lire1P11260 Gm29545-201ENSMUST00000188878 694 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm28699-201ENSMUST00000189193 696 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm29196-201ENSMUST00000189239 618 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm29339-201ENSMUST00000189613 696 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm28159-201ENSMUST00000190296 696 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm29366-201ENSMUST00000190481 699 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm28552-201ENSMUST00000190725 388 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm29407-201ENSMUST00000191468 696 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm37433-201ENSMUST00000192695 678 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm37441-201ENSMUST00000194430 678 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm38107-201ENSMUST00000194873 696 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm19620-201ENSMUST00000195972 434 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm43350-201ENSMUST00000196382 711 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm44002-201ENSMUST00000205134 594 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm7443-201ENSMUST00000206355 378 ntBASIC4.36□□□□□ -1.71
Lire1P11260 AC151843.1-201ENSMUST00000215960 691 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm18039-201ENSMUST00000217816 728 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm7034-201ENSMUST00000218638 645 ntBASIC4.36□□□□□ -1.71
Lire1P11260 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.36□□□□□ -1.71
Lire1P11260 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Lire1P11260 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Lire1P11260 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Lire1P11260 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lire1P11260 Gm23460-201ENSMUST00000083258 109 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Lire1P11260 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.36□□□□□ -1.71
Lire1P11260 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.36□□□□□ -1.71
Lire1P11260 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lire1P11260 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Lire1P11260 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Lire1P11260 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Lire1P11260 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Lire1P11260 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Lire1P11260 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Lire1P11260 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm14365-201ENSMUST00000117535 587 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm14909-201ENSMUST00000117853 351 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm15195-201ENSMUST00000118775 263 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm6591-201ENSMUST00000121063 434 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm12752-201ENSMUST00000121657 811 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm15227-201ENSMUST00000121844 399 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm7840-201ENSMUST00000122086 533 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm12591-201ENSMUST00000122407 1177 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.35□□□□□ -1.71
Lire1P11260 Gm22819-201ENSMUST00000157445 303 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm26490-201ENSMUST00000157879 140 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm23312-201ENSMUST00000158774 102 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm9587-201ENSMUST00000172449 454 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm27690-201ENSMUST00000184596 126 ntBASIC4.35□□□□□ -1.71
Lire1P11260 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Lire1P11260 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.35□□□□□ -1.71
Lire1P11260 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC4.35□□□□□ -1.71
Lire1P11260 Gm10925-201ENSMUST00000189941 678 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC4.35□□□□□ -1.71
Lire1P11260 Gm37167-201ENSMUST00000194946 396 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC4.35□□□□□ -1.71
Lire1P11260 Gm18327-201ENSMUST00000202426 830 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.35□□□□□ -1.71
Lire1P11260 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.35□□□□□ -1.71
Lire1P11260 Gm45063-201ENSMUST00000203726 472 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm44088-201ENSMUST00000204595 237 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm45727-201ENSMUST00000212886 572 ntBASIC4.35□□□□□ -1.71
Lire1P11260 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm6863-201ENSMUST00000052882 636 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Lire1P11260 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Lire1P11260 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Lire1P11260 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Lire1P11260 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Lire1P11260 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.35□□□□□ -1.71
Lire1P11260 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Lire1P11260 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Lire1P11260 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.35□□□□□ -1.71
Lire1P11260 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.35□□□□□ -1.71
Lire1P11260 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Lire1P11260 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Lire1P11260 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Lire1P11260 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms