Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm14299-201ENSMUST00000117586 397 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm15074-201ENSMUST00000117603 936 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm11393-201ENSMUST00000118019 288 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm12486-201ENSMUST00000120887 541 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm11645-201ENSMUST00000121589 649 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm13852-201ENSMUST00000122350 242 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm13092-201ENSMUST00000136346 260 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm6969-201ENSMUST00000140065 342 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm26187-201ENSMUST00000157693 101 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm22889-201ENSMUST00000158639 58 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Mir6715-201ENSMUST00000184990 57 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm43090-201ENSMUST00000202459 314 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm8745-201ENSMUST00000207846 782 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm17989-201ENSMUST00000211543 412 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 AC165437.1-201ENSMUST00000228640 536 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Gm25481-201ENSMUST00000083221 158 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Chmp6P0C0A3 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Gm23133-201ENSMUST00000104255 135 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Gm15994-201ENSMUST00000118029 402 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Gm11719-201ENSMUST00000119399 351 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Gm10292-201ENSMUST00000183142 581 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Gm29598-201ENSMUST00000188996 588 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Gm45367-201ENSMUST00000210171 347 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 CT030254.3-201ENSMUST00000225959 1231 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Gm23443-201ENSMUST00000082916 128 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Gm43369-201ENSMUST00000196373 1552 ntBASIC4.19□□□□□ -1.74
Chmp6P0C0A3 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Chmp6P0C0A3 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm12467-201ENSMUST00000117625 745 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm13366-201ENSMUST00000122198 970 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Chmp6P0C0A3 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm23098-201ENSMUST00000157552 299 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm23585-201ENSMUST00000157656 102 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm23112-201ENSMUST00000158606 125 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm2389-201ENSMUST00000160487 189 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm26460-201ENSMUST00000175061 126 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Mir6926-201ENSMUST00000184562 68 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm29334-201ENSMUST00000190334 357 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Mir129b-201ENSMUST00000197461 65 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm43651-201ENSMUST00000199796 439 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm18944-201ENSMUST00000207672 643 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm45162-201ENSMUST00000209013 618 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm45539-201ENSMUST00000210313 428 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Gm45796-201ENSMUST00000212483 114 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Chmp6P0C0A3 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Snord21-201ENSMUST00000082519 94 ntBASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Chmp6P0C0A3 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Chmp6P0C0A3 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Chmp6P0C0A3 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Chmp6P0C0A3 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Chmp6P0C0A3 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Chmp6P0C0A3 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.17□□□□□ -1.74
Chmp6P0C0A3 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.17□□□□□ -1.74
Chmp6P0C0A3 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Chmp6P0C0A3 Gm23271-201ENSMUST00000104052 124 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms