Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Shisa8J3QNX5 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Shisa8J3QNX5 AC124746.1-201ENSMUST00000227535 1300 ntBASIC4.21□□□□□ -1.73
Shisa8J3QNX5 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Shisa8J3QNX5 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Shisa8J3QNX5 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Shisa8J3QNX5 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Shisa8J3QNX5 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Shisa8J3QNX5 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.21□□□□□ -1.73
Shisa8J3QNX5 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Shisa8J3QNX5 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Shisa8J3QNX5 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Shisa8J3QNX5 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.21□□□□□ -1.73
Shisa8J3QNX5 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm26002-201ENSMUST00000101915 107 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm11970-201ENSMUST00000116105 320 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm12102-201ENSMUST00000118251 604 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm15443-201ENSMUST00000118947 820 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm12231-201ENSMUST00000119447 695 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm11804-201ENSMUST00000121663 468 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm14651-201ENSMUST00000147192 442 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm23250-201ENSMUST00000157444 267 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm22940-201ENSMUST00000158560 155 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm24734-201ENSMUST00000158860 262 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm16134-201ENSMUST00000161714 336 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Mir3110-201ENSMUST00000175053 80 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm25037-201ENSMUST00000175418 110 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm5974-201ENSMUST00000181607 986 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm28414-201ENSMUST00000190111 294 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm37681-201ENSMUST00000193880 727 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm37095-201ENSMUST00000195421 205 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm44404-201ENSMUST00000203979 636 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 CT025526.1-201ENSMUST00000217327 267 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm18557-201ENSMUST00000218710 433 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm4263-202ENSMUST00000221392 667 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 CR974485.1-201ENSMUST00000222408 402 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm24921-201ENSMUST00000083024 107 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Mir325-201ENSMUST00000083491 98 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Shisa8J3QNX5 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Neat1-201ENSMUST00000173672 20771 ntBASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.2□□□□□ -1.74
Shisa8J3QNX5 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Shisa8J3QNX5 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Gm23274-201ENSMUST00000104056 130 ntBASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Gm22591-201ENSMUST00000104243 106 ntBASIC4.2□□□□□ -1.74
Shisa8J3QNX5 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Gm15076-201ENSMUST00000117076 474 ntBASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Gm16445-201ENSMUST00000120399 714 ntBASIC4.2□□□□□ -1.74
Shisa8J3QNX5 Gm5646-201ENSMUST00000120568 714 ntBASIC4.2□□□□□ -1.74
Shisa8J3QNX5 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms