Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm34005-201ENSMUST00000215834 282 ntBASIC4.03□□□□□ -1.76
Scn3aA2ASI5 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Scn3aA2ASI5 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Gm14811-201ENSMUST00000117070 117 ntBASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Gm12025-201ENSMUST00000117768 144 ntBASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Gm23902-201ENSMUST00000157571 134 ntBASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Gm25519-201ENSMUST00000158392 127 ntBASIC4.02□□□□□ -1.77
Scn3aA2ASI5 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Scn3aA2ASI5 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm24376-201ENSMUST00000104399 127 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm9157-201ENSMUST00000117673 225 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm12465-201ENSMUST00000118591 300 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm8244-201ENSMUST00000121254 264 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm23755-201ENSMUST00000157578 343 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm29452-201ENSMUST00000187996 313 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm28860-201ENSMUST00000188103 313 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm37575-201ENSMUST00000195467 309 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm5983-201ENSMUST00000197739 770 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm5265-201ENSMUST00000076828 342 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm25800-201ENSMUST00000082636 134 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm18594-201ENSMUST00000175733 1403 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm23530-201ENSMUST00000104564 137 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm14875-201ENSMUST00000120881 319 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm24936-201ENSMUST00000122598 247 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm29064-201ENSMUST00000187014 813 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm44277-201ENSMUST00000205128 649 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Gm45006-201ENSMUST00000206078 690 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Scn3aA2ASI5 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.01□□□□□ -1.77
Scn3aA2ASI5 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm37393-201ENSMUST00000195118 3870 ntBASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm37211-201ENSMUST00000193392 3433 ntBASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4□□□□□ -1.77
Scn3aA2ASI5 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm24537-201ENSMUST00000157950 102 ntBASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm24675-201ENSMUST00000158757 259 ntBASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm24664-201ENSMUST00000158939 100 ntBASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm37097-201ENSMUST00000193676 336 ntBASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm6510-201ENSMUST00000195916 574 ntBASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm18597-201ENSMUST00000209519 694 ntBASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm8785-201ENSMUST00000220259 487 ntBASIC4□□□□□ -1.77
Scn3aA2ASI5 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4□□□□□ -1.77
Scn3aA2ASI5 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Scn3aA2ASI5 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms