Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Smarcb1Q9Z0H3 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.05□□□□□ -1.76
Smarcb1Q9Z0H3 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.05□□□□□ -1.76
Smarcb1Q9Z0H3 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.05□□□□□ -1.76
Smarcb1Q9Z0H3 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.05□□□□□ -1.76
Smarcb1Q9Z0H3 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Smarcb1Q9Z0H3 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Smarcb1Q9Z0H3 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Gm25765-201ENSMUST00000104100 132 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Gm14126-201ENSMUST00000122345 395 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Gm23441-201ENSMUST00000157268 127 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Gm22059-201ENSMUST00000157544 104 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Gm24550-201ENSMUST00000158648 279 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Gm28847-201ENSMUST00000186778 700 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Gm29704-201ENSMUST00000196011 253 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Gm44475-201ENSMUST00000204041 424 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Smarcb1Q9Z0H3 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm15180-201ENSMUST00000117745 492 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm11600-201ENSMUST00000119592 240 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm27773-201ENSMUST00000184087 78 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm9722-201ENSMUST00000194568 802 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm43405-201ENSMUST00000198642 337 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm7041-201ENSMUST00000201227 524 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm34779-201ENSMUST00000210036 263 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm20946-201ENSMUST00000212367 461 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm18120-201ENSMUST00000220079 511 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm8231-201ENSMUST00000221617 783 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.03□□□□□ -1.76
Smarcb1Q9Z0H3 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Smarcb1Q9Z0H3 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm14788-201ENSMUST00000119457 375 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm12900-201ENSMUST00000120919 573 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm12755-201ENSMUST00000122297 282 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm24898-201ENSMUST00000158133 106 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm23633-201ENSMUST00000175293 119 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Mir6374-201ENSMUST00000184003 107 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm27189-201ENSMUST00000184119 190 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm37001-201ENSMUST00000193377 190 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm18843-201ENSMUST00000194982 719 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm38008-201ENSMUST00000195333 518 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm43491-201ENSMUST00000197133 784 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm8703-201ENSMUST00000203793 730 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm44611-201ENSMUST00000207507 355 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm7119-201ENSMUST00000221345 695 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Smarcb1Q9Z0H3 Gm25800-201ENSMUST00000082636 134 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms