Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Gm45226-201ENSMUST00000206602 288 ntBASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 AC117202.1-201ENSMUST00000227007 445 ntBASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 AC131997.2-201ENSMUST00000227452 362 ntBASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Gm5518-201ENSMUST00000084171 648 ntBASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Scn8aQ9WTU3 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm14050-201ENSMUST00000117052 346 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm12261-201ENSMUST00000117499 645 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm15377-201ENSMUST00000119594 246 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm9208-201ENSMUST00000120468 948 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm8244-201ENSMUST00000121254 264 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm22034-201ENSMUST00000157283 134 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm25667-201ENSMUST00000157701 275 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm23773-201ENSMUST00000158985 296 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm28064-201ENSMUST00000185639 858 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm42905-201ENSMUST00000196237 1611 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm18189-201ENSMUST00000218153 1951 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm14975-201ENSMUST00000118741 664 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm12998-201ENSMUST00000122445 789 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm28614-201ENSMUST00000186483 458 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm45327-201ENSMUST00000211612 565 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Scn8aQ9WTU3 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Gm26145-201ENSMUST00000104476 127 ntBASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Scn8aQ9WTU3 Gm25727-201ENSMUST00000104522 131 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm13788-201ENSMUST00000120767 601 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm23257-201ENSMUST00000158322 132 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm22840-201ENSMUST00000158444 136 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm23207-201ENSMUST00000158665 102 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm18698-201ENSMUST00000192327 668 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm37698-201ENSMUST00000192605 463 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm37575-201ENSMUST00000195467 309 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.65□□□□□ -1.82
Scn8aQ9WTU3 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.65□□□□□ -1.83
Scn8aQ9WTU3 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Scn8aQ9WTU3 Gm12467-201ENSMUST00000117625 745 ntBASIC3.65□□□□□ -1.83
Scn8aQ9WTU3 Gm11829-201ENSMUST00000121003 282 ntBASIC3.65□□□□□ -1.83
Scn8aQ9WTU3 Gm16327-201ENSMUST00000137146 228 ntBASIC3.65□□□□□ -1.83
Scn8aQ9WTU3 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Scn8aQ9WTU3 Gm6900-201ENSMUST00000178971 342 ntBASIC3.65□□□□□ -1.83
Scn8aQ9WTU3 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Scn8aQ9WTU3 Gm18387-201ENSMUST00000220333 702 ntBASIC3.65□□□□□ -1.83
Scn8aQ9WTU3 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.65□□□□□ -1.83
Scn8aQ9WTU3 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Scn8aQ9WTU3 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 123.4 ms