Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim3Q9R1R2 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim3Q9R1R2 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Trim3Q9R1R2 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.9□□□□□ -1.79
Trim3Q9R1R2 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.9□□□□□ -1.79
Trim3Q9R1R2 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm15933-201ENSMUST00000117215 616 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm13501-201ENSMUST00000118477 979 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm14352-201ENSMUST00000119250 449 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm13459-201ENSMUST00000121558 646 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm15075-201ENSMUST00000122187 477 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm22453-201ENSMUST00000122801 318 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm26487-201ENSMUST00000158022 94 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm17109-201ENSMUST00000163985 358 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm16490-201ENSMUST00000165299 351 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm3191-201ENSMUST00000167139 346 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Mir6414-201ENSMUST00000183685 82 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Mir6238-201ENSMUST00000184140 129 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm28655-201ENSMUST00000191538 692 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm37319-201ENSMUST00000193500 636 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm17951-201ENSMUST00000198536 496 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm4045-201ENSMUST00000204076 310 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm18441-201ENSMUST00000223539 617 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.89□□□□□ -1.79
Trim3Q9R1R2 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm26387-201ENSMUST00000104238 132 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm12294-201ENSMUST00000119723 490 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm14927-201ENSMUST00000120283 454 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm13868-201ENSMUST00000122411 294 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm25520-201ENSMUST00000158389 118 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm26028-201ENSMUST00000158660 294 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm27155-201ENSMUST00000183716 898 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm44656-201ENSMUST00000208428 490 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm45434-201ENSMUST00000210550 293 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm18377-201ENSMUST00000215141 607 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm23928-201ENSMUST00000082469 145 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm10780-201ENSMUST00000099459 285 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Trim3Q9R1R2 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms