Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Olfr713-201ENSMUST00000098139 975 ntBASIC3.7□□□□□ -1.82
Trem1Q9JKE2 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trem1Q9JKE2 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Trem1Q9JKE2 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.7□□□□□ -1.82
Trem1Q9JKE2 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trem1Q9JKE2 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trem1Q9JKE2 AC190403.1-201ENSMUST00000224515 1325 ntBASIC3.7□□□□□ -1.82
Trem1Q9JKE2 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Mir592-201ENSMUST00000102113 96 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm22019-201ENSMUST00000104359 96 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm24831-201ENSMUST00000116778 126 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm13733-201ENSMUST00000117290 535 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm5942-201ENSMUST00000120046 439 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm15244-201ENSMUST00000121122 130 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm16147-201ENSMUST00000162143 373 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Mir3097-201ENSMUST00000175356 67 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm27165-201ENSMUST00000183951 232 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm37167-201ENSMUST00000194946 396 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Trav3-2-201ENSMUST00000198999 305 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm4734-201ENSMUST00000200117 777 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm5322-201ENSMUST00000206142 699 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm44857-201ENSMUST00000208331 196 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 AC122901.2-201ENSMUST00000216926 285 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 CT025525.4-201ENSMUST00000227728 277 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 AF357341-201ENSMUST00000083088 75 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC3.69□□□□□ -1.82
Trem1Q9JKE2 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm24273-201ENSMUST00000102332 164 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm15108-201ENSMUST00000116160 803 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm12568-201ENSMUST00000117362 624 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm11481-201ENSMUST00000120069 255 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm16100-201ENSMUST00000120489 231 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm15111-201ENSMUST00000122142 878 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm22988-201ENSMUST00000122759 144 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm16254-201ENSMUST00000131528 730 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm24395-201ENSMUST00000158139 125 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm3008-201ENSMUST00000160566 571 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm24300-201ENSMUST00000177809 109 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm24017-201ENSMUST00000178726 109 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm23952-201ENSMUST00000179380 109 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm20574-201ENSMUST00000182867 917 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm27477-201ENSMUST00000184649 143 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm29492-201ENSMUST00000187124 457 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm36939-201ENSMUST00000194889 439 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm44138-201ENSMUST00000204939 271 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Gm45392-201ENSMUST00000210441 214 ntBASIC3.68□□□□□ -1.82
Trem1Q9JKE2 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trem1Q9JKE2 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm336-201ENSMUST00000186376 1480 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Mir466j-201ENSMUST00000116876 122 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm15377-201ENSMUST00000119594 246 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm12087-201ENSMUST00000121878 258 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm22208-201ENSMUST00000122658 110 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm25293-201ENSMUST00000122792 285 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms