Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
Lima1Q9ERG0 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.75□□□□□ -1.81
Lima1Q9ERG0 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Lima1Q9ERG0 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Lima1Q9ERG0 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Lima1Q9ERG0 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Mir193b-201ENSMUST00000103784 79 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm15148-201ENSMUST00000117602 156 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm13650-201ENSMUST00000117729 433 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm14037-201ENSMUST00000120576 313 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm25843-201ENSMUST00000122582 314 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm7281-201ENSMUST00000160010 543 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm2862-201ENSMUST00000161524 328 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm11394-201ENSMUST00000181421 517 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm27044-201ENSMUST00000183033 796 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm28304-201ENSMUST00000185977 312 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm21139-201ENSMUST00000186594 877 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm29598-201ENSMUST00000188996 588 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm29256-201ENSMUST00000189094 312 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm28484-201ENSMUST00000190606 312 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm8790-201ENSMUST00000194108 322 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm8745-201ENSMUST00000207846 782 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm18672-201ENSMUST00000208035 270 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 AC159246.1-201ENSMUST00000214478 249 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 AC154510.1-201ENSMUST00000223925 737 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 CT030194.1-201ENSMUST00000225507 532 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Lima1Q9ERG0 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Gm23133-201ENSMUST00000104255 135 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Gm12387-201ENSMUST00000118573 955 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Gm1866-201ENSMUST00000120701 477 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Gm13419-201ENSMUST00000121711 271 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Gm10074-201ENSMUST00000174543 249 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Gm27828-201ENSMUST00000184108 119 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Gm28803-201ENSMUST00000190385 764 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Gm5829-201ENSMUST00000191383 351 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Gm29038-201ENSMUST00000191543 678 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Gm44703-201ENSMUST00000205724 248 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Gm45367-201ENSMUST00000210171 347 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 AC154634.3-201ENSMUST00000224589 736 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Mir30e-201ENSMUST00000083475 92 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Mir370-201ENSMUST00000083499 79 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Lima1Q9ERG0 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.73□□□□□ -1.81
Lima1Q9ERG0 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm12788-201ENSMUST00000119090 308 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm12118-201ENSMUST00000119766 532 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Amd-ps1-201ENSMUST00000120127 994 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm11830-201ENSMUST00000120175 561 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm11692-201ENSMUST00000122121 902 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms