Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Gm9911-201ENSMUST00000211467 2802 ntBASIC5.04□□□□□ -1.6
Cpsf1Q9EPU4 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Klra11-ps-201ENSMUST00000122033 810 ntBASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Gm8600-201ENSMUST00000186320 905 ntBASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 AC161054.1-201ENSMUST00000214319 184 ntBASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Gm18903-201ENSMUST00000215343 480 ntBASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 AC162934.1-201ENSMUST00000222880 309 ntBASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Cpsf1Q9EPU4 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Gm22034-201ENSMUST00000157283 134 ntBASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Gm6850-201ENSMUST00000210031 530 ntBASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 AC102815.1-201ENSMUST00000226662 1061 ntBASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Gm10356-201ENSMUST00000097152 1258 ntBASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Cpsf1Q9EPU4 Gm43881-201ENSMUST00000203051 2530 ntBASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 Gm36964-201ENSMUST00000191876 198 ntBASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 Gm37698-201ENSMUST00000192605 463 ntBASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 Gm34005-201ENSMUST00000215834 282 ntBASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 AC137842.3-201ENSMUST00000228855 2397 ntBASIC5.01□□□□□ -1.61
Cpsf1Q9EPU4 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm23532-201ENSMUST00000104569 112 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm5943-201ENSMUST00000119458 459 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm17159-201ENSMUST00000169043 482 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm29452-201ENSMUST00000187996 313 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm28860-201ENSMUST00000188103 313 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm32381-201ENSMUST00000203192 476 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm44513-201ENSMUST00000206811 439 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 AC117202.1-201ENSMUST00000227007 445 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm24950-201ENSMUST00000082768 191 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm23971-201ENSMUST00000083317 191 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm23849-201ENSMUST00000083833 191 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm26316-201ENSMUST00000083886 191 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Rnu2-10-201ENSMUST00000084010 191 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gm18609-201ENSMUST00000203370 3601 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Cpsf1Q9EPU4 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Cpsf1Q9EPU4 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cpsf1Q9EPU4 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.99□□□□□ -1.61
Cpsf1Q9EPU4 Gm25168-201ENSMUST00000104189 132 ntBASIC4.99□□□□□ -1.61
Cpsf1Q9EPU4 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cpsf1Q9EPU4 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Cpsf1Q9EPU4 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Cpsf1Q9EPU4 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 107.3 ms