Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm8224-201ENSMUST00000166178 497 ntBASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Gm27025-201ENSMUST00000182392 942 ntBASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Gm37219-201ENSMUST00000192036 926 ntBASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Gm9245-201ENSMUST00000200528 983 ntBASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Gm29884-201ENSMUST00000218403 453 ntBASIC4.62□□□□□ -1.67
Smc1aQ9CU62 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.62□□□□□ -1.67
Smc1aQ9CU62 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Gm5548-201ENSMUST00000055878 397 ntBASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Smc1aQ9CU62 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm19335-201ENSMUST00000195836 2069 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm13550-201ENSMUST00000118185 525 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm9003-201ENSMUST00000121810 482 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm22501-201ENSMUST00000158981 127 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm44354-201ENSMUST00000196017 143 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm43774-201ENSMUST00000196327 878 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm45034-201ENSMUST00000206831 482 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm45189-201ENSMUST00000208567 363 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm46998-201ENSMUST00000221444 330 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm25592-201ENSMUST00000082635 131 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Gm9597-202ENSMUST00000227632 1387 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
Smc1aQ9CU62 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm15001-201ENSMUST00000117657 795 ntBASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm13785-201ENSMUST00000119099 690 ntBASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm12087-201ENSMUST00000121878 258 ntBASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm25965-201ENSMUST00000157170 93 ntBASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Mir6938-201ENSMUST00000184173 63 ntBASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm29534-201ENSMUST00000187328 382 ntBASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm43559-201ENSMUST00000198755 466 ntBASIC4.6□□□□□ -1.67
Smc1aQ9CU62 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.6□□□□□ -1.67
Smc1aQ9CU62 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Smc1aQ9CU62 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms