Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm25537-201ENSMUST00000103851 109 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm26418-201ENSMUST00000104275 137 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm15263-201ENSMUST00000121556 642 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm22480-201ENSMUST00000122568 128 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm25966-201ENSMUST00000157169 117 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm26352-201ENSMUST00000158223 125 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm24930-201ENSMUST00000158315 83 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm29281-201ENSMUST00000188077 381 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm18900-201ENSMUST00000193218 584 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm37001-201ENSMUST00000193377 190 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm44475-201ENSMUST00000204041 424 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm18387-201ENSMUST00000220333 702 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 AV026068-224ENSMUST00000224827 928 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 AC131720.1-201ENSMUST00000218629 2132 ntBASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Rpa3Q9CQ71 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm23697-201ENSMUST00000103897 110 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm6893-201ENSMUST00000118385 522 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm15785-201ENSMUST00000119145 694 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm12358-201ENSMUST00000121842 520 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm26276-201ENSMUST00000157099 109 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm23123-201ENSMUST00000157648 144 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm24727-201ENSMUST00000158231 144 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm22890-201ENSMUST00000158642 144 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm21816-201ENSMUST00000179255 360 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm44887-201ENSMUST00000208980 178 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm18194-201ENSMUST00000210455 481 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Snora31-201ENSMUST00000083213 130 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm25581-201ENSMUST00000083410 164 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Rpa3Q9CQ71 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Rpa3Q9CQ71 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Rpa3Q9CQ71 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Rpa3Q9CQ71 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Rpa3Q9CQ71 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
Rpa3Q9CQ71 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Rpa3Q9CQ71 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.9□□□□□ -1.78
Rpa3Q9CQ71 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Gm24739-201ENSMUST00000158855 292 ntBASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Gm6650-201ENSMUST00000166710 614 ntBASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Gm37239-201ENSMUST00000193510 141 ntBASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Mir129-2-201ENSMUST00000083577 90 ntBASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms