Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm13379-201ENSMUST00000118053 621 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm15387-201ENSMUST00000120421 648 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm11909-201ENSMUST00000121424 759 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm13149-201ENSMUST00000122071 339 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm3362-201ENSMUST00000148102 466 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm25412-201ENSMUST00000180258 107 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm20574-201ENSMUST00000182867 917 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm37164-201ENSMUST00000192809 637 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm37601-201ENSMUST00000194922 394 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm18748-201ENSMUST00000198507 622 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm42896-201ENSMUST00000201249 1113 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm29920-201ENSMUST00000206876 754 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm45392-201ENSMUST00000210441 214 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm2607-201ENSMUST00000212389 627 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm8158-201ENSMUST00000219220 465 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm8112-201ENSMUST00000219637 465 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm3338-201ENSMUST00000220982 269 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm25699-201ENSMUST00000082896 167 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm23448-201ENSMUST00000083151 104 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm5518-201ENSMUST00000084171 648 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm19335-201ENSMUST00000195836 2069 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.32□□□□□ -1.72
Cstf3Q99LI7 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm22020-201ENSMUST00000104358 136 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm14142-201ENSMUST00000117833 296 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm13087-201ENSMUST00000118298 256 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm14795-201ENSMUST00000118461 471 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm12287-201ENSMUST00000119770 707 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm22985-201ENSMUST00000122754 116 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm26310-201ENSMUST00000157766 117 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm20648-201ENSMUST00000175815 328 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm22776-201ENSMUST00000178634 94 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm23767-201ENSMUST00000179278 94 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm3496-201ENSMUST00000188283 745 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 Gm29038-201ENSMUST00000191543 678 ntBASIC4.31□□□□□ -1.72
Cstf3Q99LI7 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 117 ms