Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm28574-201ENSMUST00000185757 699 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm5116-201ENSMUST00000187732 463 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm28397-201ENSMUST00000187970 699 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm29627-201ENSMUST00000187984 463 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm29366-201ENSMUST00000190481 699 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm10048-201ENSMUST00000194196 372 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm4321-201ENSMUST00000200520 442 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm44818-201ENSMUST00000206608 358 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm18468-201ENSMUST00000207321 369 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm18470-201ENSMUST00000207467 420 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm18465-201ENSMUST00000207468 369 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm18464-201ENSMUST00000207803 420 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm18458-201ENSMUST00000207908 369 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm18461-201ENSMUST00000208421 420 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm45422-201ENSMUST00000211476 246 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm7768-201ENSMUST00000222988 597 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm2645-201ENSMUST00000223516 547 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 AC109172.1-201ENSMUST00000227503 187 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 AC152944.1-201ENSMUST00000220160 3101 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.86□□□□□ -1.63
Clrn1Q8K445 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Clrn1Q8K445 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.86□□□□□ -1.63
Clrn1Q8K445 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Clrn1Q8K445 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm24273-201ENSMUST00000102332 164 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm16431-201ENSMUST00000117454 431 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm8424-201ENSMUST00000117716 988 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm14867-201ENSMUST00000120156 866 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm7071-201ENSMUST00000120458 462 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm6591-201ENSMUST00000121063 434 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm9225-201ENSMUST00000121921 836 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm12650-201ENSMUST00000121966 258 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm2020-201ENSMUST00000145242 579 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm25670-201ENSMUST00000178423 107 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm26239-201ENSMUST00000178842 107 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm24267-201ENSMUST00000179841 107 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Mir6400-201ENSMUST00000184870 92 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm28353-201ENSMUST00000186482 570 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm28533-201ENSMUST00000186741 570 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm37492-201ENSMUST00000191948 376 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Trbv24-201ENSMUST00000194614 347 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm37418-201ENSMUST00000195031 274 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm43494-201ENSMUST00000197672 388 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm7039-201ENSMUST00000205138 346 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm33601-201ENSMUST00000210001 961 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm3690-201ENSMUST00000211341 262 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm6056-201ENSMUST00000221253 488 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm9269-201ENSMUST00000221661 578 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 AC144628.2-201ENSMUST00000227374 352 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm7808-201ENSMUST00000082002 387 ntBASIC4.85□□□□□ -1.63
Clrn1Q8K445 Gm24292-201ENSMUST00000082888 107 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms