Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm24503-201ENSMUST00000158454 135 ntBASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Mir6345-201ENSMUST00000184286 128 ntBASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Gm36964-201ENSMUST00000191876 198 ntBASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Gm37698-201ENSMUST00000192605 463 ntBASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Gm7099-201ENSMUST00000080066 554 ntBASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Olfr713-201ENSMUST00000098139 975 ntBASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc28aQ8CEI3 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm37407-201ENSMUST00000194793 1316 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm13687-201ENSMUST00000119857 282 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm15387-201ENSMUST00000120421 648 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm6373-201ENSMUST00000121026 360 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm15263-201ENSMUST00000121556 642 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm13459-201ENSMUST00000121558 646 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm22889-201ENSMUST00000158639 58 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm25369-201ENSMUST00000158848 132 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Mir1251-201ENSMUST00000175486 84 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm26238-201ENSMUST00000175538 117 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Mir6971-201ENSMUST00000183497 63 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm28596-201ENSMUST00000185870 696 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm32295-201ENSMUST00000192558 696 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm38330-201ENSMUST00000192743 959 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm31260-201ENSMUST00000193478 696 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm9722-201ENSMUST00000194568 802 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm21006-201ENSMUST00000196930 667 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm44475-201ENSMUST00000204041 424 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm5518-201ENSMUST00000084171 648 ntBASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ccdc28aQ8CEI3 Gm17101-201ENSMUST00000169520 1588 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm25765-201ENSMUST00000104100 132 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm9427-201ENSMUST00000116187 651 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm14768-201ENSMUST00000122126 678 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm3757-201ENSMUST00000125878 675 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm25386-201ENSMUST00000157814 288 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm25438-201ENSMUST00000158281 110 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Mir3062-201ENSMUST00000174986 105 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm11394-201ENSMUST00000181421 517 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm27864-201ENSMUST00000183704 190 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Mir7020-201ENSMUST00000183787 70 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm28385-201ENSMUST00000185671 292 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm20954-201ENSMUST00000189078 644 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm44952-201ENSMUST00000204443 433 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm3829-201ENSMUST00000222362 619 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Snord22-201ENSMUST00000083153 126 ntBASIC3.8□□□□□ -1.8
Ccdc28aQ8CEI3 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms