Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm29148-201ENSMUST00000188140 336 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm29428-201ENSMUST00000190086 409 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm38201-201ENSMUST00000192143 387 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm37098-201ENSMUST00000192290 244 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm18611-201ENSMUST00000200334 1118 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm44032-201ENSMUST00000204841 166 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm8132-201ENSMUST00000204938 640 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 AC151843.1-201ENSMUST00000215960 691 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.84□□□□□ -1.63
Nup88Q8CEC0 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nup88Q8CEC0 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.84□□□□□ -1.64
Nup88Q8CEC0 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm44562-201ENSMUST00000207194 1347 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm13567-201ENSMUST00000118026 247 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm14771-201ENSMUST00000118249 203 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm1866-201ENSMUST00000120701 477 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm23228-201ENSMUST00000157296 270 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm25908-201ENSMUST00000157624 98 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm27899-201ENSMUST00000184715 64 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm38283-201ENSMUST00000193041 695 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm44023-201ENSMUST00000203710 469 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm44946-201ENSMUST00000208425 572 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 CT571256.1-201ENSMUST00000226045 585 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm10042-201ENSMUST00000079884 78 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm23846-201ENSMUST00000083835 107 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Nup88Q8CEC0 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm25169-201ENSMUST00000104190 129 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm24788-201ENSMUST00000104283 156 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm11344-201ENSMUST00000122011 335 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm25177-201ENSMUST00000122634 117 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm24380-201ENSMUST00000122696 324 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm22339-201ENSMUST00000157718 62 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm25713-201ENSMUST00000158625 109 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm17194-201ENSMUST00000164610 348 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm3191-201ENSMUST00000167139 346 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Mir5106-201ENSMUST00000174936 73 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm5473-201ENSMUST00000179326 642 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm27760-201ENSMUST00000185048 114 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm28471-201ENSMUST00000185994 615 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm29563-201ENSMUST00000187249 496 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm43559-201ENSMUST00000198755 466 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
Nup88Q8CEC0 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Nup88Q8CEC0 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm46998-201ENSMUST00000221444 330 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 AC107663.3-201ENSMUST00000225873 601 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Nup88Q8CEC0 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm6545-201ENSMUST00000217186 1786 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.82□□□□□ -1.64
Nup88Q8CEC0 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Nup88Q8CEC0 Mir804-201ENSMUST00000103251 95 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms