Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm27899-201ENSMUST00000184715 64 ntBASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Gm28304-201ENSMUST00000185977 312 ntBASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Gm29256-201ENSMUST00000189094 312 ntBASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Gm28484-201ENSMUST00000190606 312 ntBASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Gm38283-201ENSMUST00000193041 695 ntBASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Gm38008-201ENSMUST00000195333 518 ntBASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Gm44852-201ENSMUST00000207950 369 ntBASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Gm4263-202ENSMUST00000221392 667 ntBASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Diaph3-206ENSMUST00000226745 713 ntBASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Lrif1Q8CDD9 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm12467-201ENSMUST00000117625 745 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm11698-201ENSMUST00000117948 455 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm14589-201ENSMUST00000121640 727 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm25386-201ENSMUST00000157814 288 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Mir5134-201ENSMUST00000175529 78 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm15143-201ENSMUST00000178180 714 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm21816-201ENSMUST00000179255 360 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm11394-201ENSMUST00000181421 517 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm28872-201ENSMUST00000191518 158 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm37684-201ENSMUST00000192779 355 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm20177-201ENSMUST00000203705 334 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm45034-201ENSMUST00000206831 482 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm46998-201ENSMUST00000221444 330 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 AC122357.2-201ENSMUST00000220732 1525 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.94□□□□□ -1.78
Lrif1Q8CDD9 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm44224-201ENSMUST00000204131 1463 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm14365-201ENSMUST00000117535 587 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm12103-201ENSMUST00000121892 362 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm22613-201ENSMUST00000122679 292 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm22314-201ENSMUST00000158007 281 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm2389-201ENSMUST00000160487 189 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm3191-201ENSMUST00000167139 346 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm18522-201ENSMUST00000173947 650 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm25525-201ENSMUST00000177701 107 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm26178-201ENSMUST00000177706 107 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm26465-201ENSMUST00000178517 107 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm24317-201ENSMUST00000178536 107 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm25021-201ENSMUST00000179184 107 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm22995-201ENSMUST00000179670 107 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm24424-201ENSMUST00000179714 107 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm24389-201ENSMUST00000179962 107 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm25672-201ENSMUST00000180111 107 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Mir6975-201ENSMUST00000184879 61 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm29163-201ENSMUST00000188029 107 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm37857-201ENSMUST00000191784 1199 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm30280-201ENSMUST00000192214 262 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm37300-201ENSMUST00000193327 280 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm17937-201ENSMUST00000197908 742 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Gm36382-201ENSMUST00000198892 541 ntBASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
Lrif1Q8CDD9 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms