Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm43384-201ENSMUST00000200569 637 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm44023-201ENSMUST00000203710 469 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm9560-201ENSMUST00000205012 1201 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Gm18855-201ENSMUST00000206689 570 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Snord22-201ENSMUST00000083153 126 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 AC162938.2-205ENSMUST00000217551 2828 ntBASIC6.4□□□□□ -1.38
Usp40Q8BWR4 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Usp40Q8BWR4 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Usp40Q8BWR4 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC6.4□□□□□ -1.39
Usp40Q8BWR4 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Usp40Q8BWR4 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Usp40Q8BWR4 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Usp40Q8BWR4 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm44567-201ENSMUST00000205645 2631 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm25726-201ENSMUST00000104529 129 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm15021-201ENSMUST00000117832 742 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm14172-201ENSMUST00000118255 644 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm11843-201ENSMUST00000118984 425 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm14067-201ENSMUST00000119340 314 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm13482-201ENSMUST00000119842 254 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm14991-201ENSMUST00000119913 598 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm6591-201ENSMUST00000121063 434 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Llph-ps1-201ENSMUST00000121281 390 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm12332-201ENSMUST00000121397 922 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm12005-201ENSMUST00000121451 379 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm14500-201ENSMUST00000121647 113 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Llph-ps2-201ENSMUST00000122000 393 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm22452-201ENSMUST00000122804 104 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm22536-201ENSMUST00000158171 134 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm23025-201ENSMUST00000158769 111 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm16236-201ENSMUST00000159588 379 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm17154-201ENSMUST00000165748 431 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm21737-201ENSMUST00000178112 664 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm20874-201ENSMUST00000178356 663 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm21744-201ENSMUST00000178403 662 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm22243-201ENSMUST00000178754 120 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm20901-201ENSMUST00000180177 664 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Mir6960-201ENSMUST00000183449 61 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm28090-201ENSMUST00000189458 664 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm21647-201ENSMUST00000189755 664 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm36953-201ENSMUST00000195295 268 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm44266-201ENSMUST00000205235 500 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm45910-201ENSMUST00000212493 1003 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 AC109212.1-201ENSMUST00000215561 427 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 AC132384.9-201ENSMUST00000218085 277 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 AC168881.1-201ENSMUST00000226018 430 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm23242-201ENSMUST00000083055 107 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Gm13477-201ENSMUST00000121620 2687 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 AC132336.1-201ENSMUST00000222844 1740 ntBASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Usp40Q8BWR4 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm12873-201ENSMUST00000119988 422 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm13232-201ENSMUST00000121816 632 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm24438-201ENSMUST00000157893 115 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm25714-201ENSMUST00000158626 296 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm6245-201ENSMUST00000164699 768 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Mir3104-201ENSMUST00000174911 63 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm19898-201ENSMUST00000177490 251 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm27036-201ENSMUST00000182465 980 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Mir6933-201ENSMUST00000184982 81 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm5372-201ENSMUST00000187540 409 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm28389-201ENSMUST00000190090 697 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm37098-201ENSMUST00000192290 244 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm19457-201ENSMUST00000200995 448 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms