Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm3454-201ENSMUST00000185571 412 ntBASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Gm28412-201ENSMUST00000187243 177 ntBASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Gm43096-201ENSMUST00000196173 421 ntBASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Gm43171-201ENSMUST00000199882 291 ntBASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 AC173482.2-201ENSMUST00000224044 750 ntBASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 AC139845.2-201ENSMUST00000227504 436 ntBASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Mir421-201ENSMUST00000083575 76 ntBASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Ddx55Q6ZPL9 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Gm43498-201ENSMUST00000202002 1486 ntBASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 AC134917.1-201ENSMUST00000220517 1449 ntBASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Mir292-201ENSMUST00000104847 82 ntBASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Gm6664-201ENSMUST00000119138 468 ntBASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Gm11631-201ENSMUST00000119220 156 ntBASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Gm15745-201ENSMUST00000119807 115 ntBASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Gm9294-201ENSMUST00000165198 789 ntBASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Gm22243-201ENSMUST00000178754 120 ntBASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Gm6113-201ENSMUST00000180319 639 ntBASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Gm18016-201ENSMUST00000216119 801 ntBASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ddx55Q6ZPL9 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.56
Ddx55Q6ZPL9 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Ddx55Q6ZPL9 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.34□□□□□ -1.56
Ddx55Q6ZPL9 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.34□□□□□ -1.56
Ddx55Q6ZPL9 Gm9496-201ENSMUST00000191295 1601 ntBASIC5.34□□□□□ -1.56
Ddx55Q6ZPL9 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.34□□□□□ -1.56
Ddx55Q6ZPL9 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.34□□□□□ -1.56
Ddx55Q6ZPL9 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm23431-201ENSMUST00000104006 107 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm23743-201ENSMUST00000157389 274 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm24961-201ENSMUST00000157918 184 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm23115-201ENSMUST00000158480 108 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Mir5106-201ENSMUST00000174936 73 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Mir7j-201ENSMUST00000184427 122 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm18667-201ENSMUST00000186523 484 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm28997-201ENSMUST00000188759 429 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm22897-201ENSMUST00000197860 128 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm7946-201ENSMUST00000203326 958 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm44118-201ENSMUST00000204665 229 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 AC152951.1-201ENSMUST00000218907 266 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 AC134468.2-201ENSMUST00000222549 672 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 132.3 ms