Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ClpbQ60649 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.43□□□□□ -1.7
ClpbQ60649 Gm28437-201ENSMUST00000190277 783 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 Gm37961-201ENSMUST00000192729 299 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 Gm37164-201ENSMUST00000192809 637 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.43□□□□□ -1.7
ClpbQ60649 Gm43142-201ENSMUST00000198670 361 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ClpbQ60649 Gm43384-201ENSMUST00000200569 637 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ClpbQ60649 Gm45651-201ENSMUST00000210857 335 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 AC192616.3-201ENSMUST00000220797 1124 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ClpbQ60649 AC167192.4-201ENSMUST00000224087 993 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 CT009550.5-201ENSMUST00000226286 382 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ClpbQ60649 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ClpbQ60649 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ClpbQ60649 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ClpbQ60649 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ClpbQ60649 Gm23300-201ENSMUST00000082712 125 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 Gm25140-201ENSMUST00000083254 140 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 Mir421-201ENSMUST00000083575 76 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 Mir16-2-201ENSMUST00000083672 95 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 Gm5518-201ENSMUST00000084171 648 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 Mir504-201ENSMUST00000093602 79 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ClpbQ60649 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ClpbQ60649 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ClpbQ60649 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ClpbQ60649 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ClpbQ60649 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ClpbQ60649 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ClpbQ60649 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
ClpbQ60649 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ClpbQ60649 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
ClpbQ60649 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ClpbQ60649 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
ClpbQ60649 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.43□□□□□ -1.7
ClpbQ60649 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ClpbQ60649 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ClpbQ60649 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ClpbQ60649 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ClpbQ60649 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ClpbQ60649 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ClpbQ60649 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ClpbQ60649 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ClpbQ60649 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
ClpbQ60649 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ClpbQ60649 Gm15168-201ENSMUST00000121057 316 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ClpbQ60649 Gm26347-201ENSMUST00000157526 131 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm16114-201ENSMUST00000161930 300 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ClpbQ60649 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ClpbQ60649 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm27342-201ENSMUST00000183530 109 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Mir6963-201ENSMUST00000183535 71 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC4.42□□□□□ -1.7
ClpbQ60649 Gm19214-201ENSMUST00000191956 1083 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm38046-201ENSMUST00000192733 550 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm38150-201ENSMUST00000192996 452 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm37272-201ENSMUST00000193401 488 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm43005-201ENSMUST00000199015 648 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm43276-201ENSMUST00000199712 364 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ClpbQ60649 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm4501-201ENSMUST00000207330 551 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm4558-201ENSMUST00000207886 521 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm4528-201ENSMUST00000207905 551 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm9375-201ENSMUST00000208899 903 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ClpbQ60649 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ClpbQ60649 AC121960.3-201ENSMUST00000227077 623 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ClpbQ60649 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ClpbQ60649 Olfr881-201ENSMUST00000074611 948 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ClpbQ60649 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ClpbQ60649 Gm23447-201ENSMUST00000082798 163 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Gm25147-201ENSMUST00000083030 105 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ClpbQ60649 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ClpbQ60649 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.42□□□□□ -1.7
ClpbQ60649 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ClpbQ60649 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.41□□□□□ -1.7
ClpbQ60649 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ClpbQ60649 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.41□□□□□ -1.7
ClpbQ60649 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ClpbQ60649 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ClpbQ60649 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ClpbQ60649 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms