Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm25799-201ENSMUST00000082643 107 ntBASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Trafd1Q3UDK1 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm26273-201ENSMUST00000104180 131 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm23319-201ENSMUST00000104467 131 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm14786-201ENSMUST00000117127 944 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm15377-201ENSMUST00000119594 246 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm13677-201ENSMUST00000120739 595 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm8244-201ENSMUST00000121254 264 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm23228-201ENSMUST00000157296 270 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm25386-201ENSMUST00000157814 288 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm24961-201ENSMUST00000157918 184 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm24905-201ENSMUST00000158129 104 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm23198-201ENSMUST00000158811 91 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm3025-201ENSMUST00000163454 489 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm2878-201ENSMUST00000170173 486 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm5473-201ENSMUST00000179326 642 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm8498-201ENSMUST00000188227 974 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm19280-201ENSMUST00000190191 205 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm38053-201ENSMUST00000193938 160 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm36997-201ENSMUST00000195090 707 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm45317-201ENSMUST00000210385 223 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm18645-202ENSMUST00000212222 760 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm45735-201ENSMUST00000212779 319 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 AC162376.1-201ENSMUST00000220120 435 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 AC079644.1-201ENSMUST00000220586 405 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm46996-201ENSMUST00000220924 408 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 AC159263.3-201ENSMUST00000223434 460 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm23102-201ENSMUST00000083724 116 ntBASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trafd1Q3UDK1 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm15018-201ENSMUST00000117090 633 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm12467-201ENSMUST00000117625 745 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm9432-201ENSMUST00000117810 759 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm13831-201ENSMUST00000118764 302 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm4732-201ENSMUST00000118778 473 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm15785-201ENSMUST00000119145 694 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm13737-201ENSMUST00000119793 232 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm13788-201ENSMUST00000120767 601 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm12001-201ENSMUST00000121727 913 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm12885-201ENSMUST00000122246 328 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm25177-201ENSMUST00000122634 117 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm25999-201ENSMUST00000175398 133 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm5974-201ENSMUST00000181607 986 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm28920-201ENSMUST00000189957 699 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm8790-201ENSMUST00000194108 322 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm38268-201ENSMUST00000195813 193 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm44665-201ENSMUST00000205381 251 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm45523-201ENSMUST00000210712 799 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 120.3 ms