Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Gm18011-201ENSMUST00000203717 565 ntBASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Gm3189-201ENSMUST00000205595 832 ntBASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Gm45215-201ENSMUST00000206407 395 ntBASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.88□□□□□ -1.63
Usp39Q3TIX9 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Gm26330-201ENSMUST00000082817 104 ntBASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Gm23514-201ENSMUST00000082827 130 ntBASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Usp39Q3TIX9 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm23274-201ENSMUST00000104056 130 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm22468-201ENSMUST00000116680 120 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm26248-201ENSMUST00000116700 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm26137-201ENSMUST00000116701 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm26190-201ENSMUST00000116704 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm24617-201ENSMUST00000116705 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm25778-201ENSMUST00000116713 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm25774-201ENSMUST00000116717 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm22102-201ENSMUST00000116730 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm23177-201ENSMUST00000116784 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm24193-201ENSMUST00000116801 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm24744-201ENSMUST00000116833 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm24427-201ENSMUST00000116896 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm22346-201ENSMUST00000116918 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm23606-201ENSMUST00000116938 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm22029-201ENSMUST00000116940 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm26298-201ENSMUST00000116956 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm23844-201ENSMUST00000116959 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm24484-201ENSMUST00000117009 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm25347-201ENSMUST00000117026 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm22112-201ENSMUST00000117032 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm7657-201ENSMUST00000118851 666 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm14785-201ENSMUST00000120185 539 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm11522-201ENSMUST00000120533 176 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm15022-201ENSMUST00000122074 746 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm5699-201ENSMUST00000152491 723 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm11507-201ENSMUST00000156462 412 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm7609-204ENSMUST00000161424 461 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm9593-201ENSMUST00000166034 469 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm22991-201ENSMUST00000178126 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm25754-201ENSMUST00000178653 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm22419-201ENSMUST00000178780 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm24802-201ENSMUST00000178897 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm25208-201ENSMUST00000178964 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm24567-201ENSMUST00000179294 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm23943-201ENSMUST00000179712 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm25228-201ENSMUST00000180121 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm23304-201ENSMUST00000180209 121 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Mir7012-201ENSMUST00000183900 64 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm37882-201ENSMUST00000195254 196 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm44604-201ENSMUST00000205475 496 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm44857-201ENSMUST00000208331 196 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm7624-201ENSMUST00000209702 435 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 Gm45422-201ENSMUST00000211476 246 ntBASIC4.87□□□□□ -1.63
Usp39Q3TIX9 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms