Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col8a1Q00780 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col8a1Q00780 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col8a1Q00780 Gm37880-201ENSMUST00000192216 3257 ntBASIC4.7□□□□□ -1.66
Col8a1Q00780 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col8a1Q00780 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm43210-201ENSMUST00000196743 6152 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col8a1Q00780 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm14756-201ENSMUST00000116395 240 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.69□□□□□ -1.66
Col8a1Q00780 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm23579-201ENSMUST00000158528 103 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm25243-201ENSMUST00000174912 207 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col8a1Q00780 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm4845-201ENSMUST00000179202 562 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm4832-201ENSMUST00000182679 399 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm27875-201ENSMUST00000184425 123 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm28299-201ENSMUST00000189908 339 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Mir409-201ENSMUST00000198153 79 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC4.69□□□□□ -1.66
Col8a1Q00780 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col8a1Q00780 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm8942-201ENSMUST00000217892 400 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.69□□□□□ -1.66
Col8a1Q00780 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm32526-201ENSMUST00000221878 981 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 CT030195.1-201ENSMUST00000223887 378 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col8a1Q00780 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col8a1Q00780 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col8a1Q00780 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 AC154755.2-201ENSMUST00000224384 2857 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm45311-201ENSMUST00000211086 1330 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col8a1Q00780 AC144733.2-201ENSMUST00000222552 2292 ntBASIC4.69□□□□□ -1.66
Col8a1Q00780 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col8a1Q00780 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm36962-201ENSMUST00000192114 1761 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col8a1Q00780 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm15101-201ENSMUST00000178818 1502 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col8a1Q00780 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm43027-201ENSMUST00000202906 3691 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Mir1193-201ENSMUST00000116761 121 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm12328-201ENSMUST00000118611 197 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm25278-201ENSMUST00000157267 120 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm25184-201ENSMUST00000157753 163 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Ear-ps7-201ENSMUST00000161287 442 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm22911-201ENSMUST00000177920 107 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm21809-201ENSMUST00000178495 468 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm17412-201ENSMUST00000179261 468 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm29231-201ENSMUST00000179850 319 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm27999-201ENSMUST00000183539 193 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm27193-201ENSMUST00000184217 586 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm34176-201ENSMUST00000192621 474 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm37773-201ENSMUST00000194141 2120 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm18553-201ENSMUST00000194152 634 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm5551-201ENSMUST00000199720 690 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm45700-201ENSMUST00000205866 347 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 Gm19880-201ENSMUST00000207731 318 ntBASIC4.68□□□□□ -1.66
Col8a1Q00780 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms