Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm5762-201ENSMUST00000119204 258 ntBASIC5.54□□□□□ -1.52
Cux1P53564 Gm6265-201ENSMUST00000149263 231 ntBASIC5.54□□□□□ -1.52
Cux1P53564 Gm4479-201ENSMUST00000178807 171 ntBASIC5.54□□□□□ -1.52
Cux1P53564 Gm37698-201ENSMUST00000192605 463 ntBASIC5.54□□□□□ -1.52
Cux1P53564 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cux1P53564 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Cux1P53564 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cux1P53564 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Cux1P53564 AC158392.2-201ENSMUST00000225402 969 ntBASIC5.54□□□□□ -1.52
Cux1P53564 AC154634.4-201ENSMUST00000226077 2665 ntBASIC5.54□□□□□ -1.52
Cux1P53564 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cux1P53564 Gm6361-201ENSMUST00000091031 435 ntBASIC5.54□□□□□ -1.52
Cux1P53564 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
Cux1P53564 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Cux1P53564 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Cux1P53564 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Cux1P53564 Gm14816-201ENSMUST00000117174 294 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Gm12982-201ENSMUST00000117408 190 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Gm22910-201ENSMUST00000178568 132 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
Cux1P53564 Gm7948-201ENSMUST00000212607 844 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Cux1P53564 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Cux1P53564 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Cux1P53564 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Cux1P53564 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC5.53□□□□□ -1.52
Cux1P53564 Gm37298-201ENSMUST00000193770 3868 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Gm43715-201ENSMUST00000196307 2715 ntBASIC5.53□□□□□ -1.52
Cux1P53564 AC122840.2-201ENSMUST00000221030 2659 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cux1P53564 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cux1P53564 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cux1P53564 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Cux1P53564 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Cux1P53564 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Cux1P53564 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Cux1P53564 Gm14622-201ENSMUST00000117117 468 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Gm11408-201ENSMUST00000117889 519 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Gm14875-201ENSMUST00000120881 319 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC5.53□□□□□ -1.52
Cux1P53564 Gm23123-201ENSMUST00000157648 144 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Gm24537-201ENSMUST00000157950 102 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Gm24727-201ENSMUST00000158231 144 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Gm23028-201ENSMUST00000158773 265 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.53□□□□□ -1.52
Cux1P53564 Gm45006-201ENSMUST00000206078 690 ntBASIC5.53□□□□□ -1.52
Cux1P53564 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC5.53□□□□□ -1.52
Cux1P53564 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Cux1P53564 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cux1P53564 AC161254.1-201ENSMUST00000220310 3842 ntBASIC5.52□□□□□ -1.53
Cux1P53564 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
Cux1P53564 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.52□□□□□ -1.53
Cux1P53564 Gm4596-201ENSMUST00000117197 442 ntBASIC5.52□□□□□ -1.53
Cux1P53564 Gm12095-201ENSMUST00000121962 816 ntBASIC5.52□□□□□ -1.53
Cux1P53564 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.52□□□□□ -1.53
Cux1P53564 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.52□□□□□ -1.53
Cux1P53564 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC5.52□□□□□ -1.53
Cux1P53564 Gm45409-201ENSMUST00000211486 252 ntBASIC5.52□□□□□ -1.53
Cux1P53564 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.52□□□□□ -1.53
Cux1P53564 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC5.52□□□□□ -1.53
Cux1P53564 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Cux1P53564 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Cux1P53564 Gm10287-202ENSMUST00000180599 4059 ntBASIC5.52□□□□□ -1.53
Cux1P53564 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC5.52□□□□□ -1.53
Cux1P53564 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cux1P53564 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cux1P53564 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cux1P53564 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.51□□□□□ -1.53
Cux1P53564 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cux1P53564 Gm42770-201ENSMUST00000199657 4155 ntBASIC5.51□□□□□ -1.53
Cux1P53564 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cux1P53564 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cux1P53564 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.51□□□□□ -1.53
Cux1P53564 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC5.51□□□□□ -1.53
Cux1P53564 Gm25539-201ENSMUST00000116886 122 ntBASIC5.51□□□□□ -1.53
Cux1P53564 Gm13873-201ENSMUST00000119208 427 ntBASIC5.51□□□□□ -1.53
Cux1P53564 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Cux1P53564 Gm24380-201ENSMUST00000122696 324 ntBASIC5.51□□□□□ -1.53
Cux1P53564 Gm22322-201ENSMUST00000157151 111 ntBASIC5.51□□□□□ -1.53
Cux1P53564 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.51□□□□□ -1.53
Cux1P53564 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cux1P53564 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.51□□□□□ -1.53
Cux1P53564 Gm43308-201ENSMUST00000197236 373 ntBASIC5.51□□□□□ -1.53
Cux1P53564 Gm43932-201ENSMUST00000204499 52 ntBASIC5.51□□□□□ -1.53
Cux1P53564 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cux1P53564 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC5.51□□□□□ -1.53
Cux1P53564 AC158631.2-201ENSMUST00000219999 478 ntBASIC5.51□□□□□ -1.53
Cux1P53564 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.51□□□□□ -1.53
Cux1P53564 AC124729.1-201ENSMUST00000225327 976 ntBASIC5.51□□□□□ -1.53
Cux1P53564 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.51□□□□□ -1.53
Cux1P53564 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cux1P53564 AC153522.2-201ENSMUST00000218389 3853 ntBASIC5.51□□□□□ -1.53
Cux1P53564 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.51□□□□□ -1.53
Cux1P53564 Gm42801-201ENSMUST00000202562 2865 ntBASIC5.51□□□□□ -1.53
Cux1P53564 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Cux1P53564 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cux1P53564 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cux1P53564 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms